Literature DB >> 23242375

Transmission ratio distortion: review of concept and implications for genetic association studies.

Lam Opal Huang1, Aurélie Labbe, Claire Infante-Rivard.   

Abstract

Transmission ratio distortion (TRD) occurs when one of the two alleles from either parent is preferentially transmitted to the offspring. This leads to a statistical departure from the Mendelian law of inheritance, which states that each of the two parental alleles is transmitted to offspring with a probability of 0.5. A number of mechanisms are thought to induce TRD such as meiotic drive, gametic competition, and embryo lethality. TRD has been extensively studied in animals, but the prevalence of TRD in humans remains largely unknown. Nevertheless, understanding the TRD phenomenon and taking it into consideration in many aspects of human genetics has potential benefits that have not been sufficiently emphasized in the current literature. In this review, we discuss the importance of TRD in three distinct but related fields of genetics: developmental genetics which studies the genetic abnormalities in zygotic and embryonic development, statistical genetics/genetic epidemiology which utilizes population study designs and statistical models to interpret the role of genes in human health, and population genetics which is concerned with genetic diversity in populations in an evolutionary context. From the perspective of developmental genetics, studying TRD leads to the identification of the processes and mechanisms for differential survival observed in embryos. As a result, it is a genetic force which affects allele frequency at the population, as well as, at the organismal level. Therefore, it has implications on genetic diversity of the population over time. From the perspective of genetic epidemiology, the TRD influence on a marker locus is a confounding factor which has to be adequately dealt with to correctly interpret linkage or association study results. These aspects are developed in this review. In addition to these theoretical notions, a brief summary of the empirical evidence of the TRD phenomenon in human and mouse studies is provided. The objective of our paper is to show the potentially important role of TRD in many areas of genetics, and to create an incentive for future research.

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Year:  2012        PMID: 23242375     DOI: 10.1007/s00439-012-1257-0

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  67 in total

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6.  Segregation distortion in myotonic dystrophy.

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  22 in total

1.  Analysis of case-parent trios for imprinting effect using a loglinear model with adjustment for sex-of-parent-specific transmission ratio distortion.

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3.  A flexible bayesian model for testing for transmission ratio distortion.

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Journal:  Eur J Hum Genet       Date:  2015-12-16       Impact factor: 4.246

7.  A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2.

Authors:  John P Didion; Andrew P Morgan; Amelia M-F Clayshulte; Rachel C Mcmullan; Liran Yadgary; Petko M Petkov; Timothy A Bell; Daniel M Gatti; James J Crowley; Kunjie Hua; David L Aylor; Ling Bai; Mark Calaway; Elissa J Chesler; John E French; Thomas R Geiger; Terry J Gooch; Theodore Garland; Alison H Harrill; Kent Hunter; Leonard McMillan; Matt Holt; Darla R Miller; Deborah A O'Brien; Kenneth Paigen; Wenqi Pan; Lucy B Rowe; Ginger D Shaw; Petr Simecek; Patrick F Sullivan; Karen L Svenson; George M Weinstock; David W Threadgill; Daniel Pomp; Gary A Churchill; Fernando Pardo-Manuel de Villena
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8.  Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array.

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9.  Copy number variation in Y chromosome multicopy genes is linked to a paternal parent-of-origin effect on CNS autoimmune disease in female offspring.

Authors:  Laure K Case; Emma H Wall; Erin E Osmanski; Julie A Dragon; Naresha Saligrama; James F Zachary; Bernardo Lemos; Elizabeth P Blankenhorn; Cory Teuscher
Journal:  Genome Biol       Date:  2015-02-10       Impact factor: 13.583

10.  Analysis of Case-Parent Trios Using a Loglinear Model with Adjustment for Transmission Ratio Distortion.

Authors:  Lam O Huang; Claire Infante-Rivard; Aurélie Labbe
Journal:  Front Genet       Date:  2016-08-31       Impact factor: 4.599

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