Literature DB >> 25758173

Excision of Expanded GAA Repeats Alleviates the Molecular Phenotype of Friedreich's Ataxia.

Yanjie Li1, Urszula Polak2, Angela D Bhalla1, Natalia Rozwadowska3, Jill Sergesketter Butler1, David R Lynch4, Sharon Y R Dent5, Marek Napierala6.   

Abstract

Friedreich's ataxia (FRDA) is an autosomal recessive neurological disease caused by expansions of guanine-adenine-adenine (GAA) repeats in intron 1 of the frataxin (FXN) gene. The expansion results in significantly decreased frataxin expression. We report that human FRDA cells can be corrected by zinc finger nuclease-mediated excision of the expanded GAA repeats. Editing of a single expanded GAA allele created heterozygous, FRDA carrier-like cells and significantly increased frataxin expression. This correction persisted during reprogramming of zinc finger nuclease-edited fibroblasts to induced pluripotent stem cells and subsequent differentiation into neurons. The expression of FRDA biomarkers was normalized in corrected patient cells and disease-associated phenotypes, such as decreases in aconitase activity and intracellular ATP levels, were reversed in zinc finger nuclease corrected neuronal cells. Genetically and phenotypically corrected patient cells represent not only a preferred disease-relevant model system to study pathogenic mechanisms, but also a critical step towards development of cell replacement therapy.

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Year:  2015        PMID: 25758173      PMCID: PMC4817761          DOI: 10.1038/mt.2015.41

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  53 in total

1.  Generation of induced pluripotent stem cell lines from Friedreich ataxia patients.

Authors:  Jun Liu; Paul J Verma; Marguerite V Evans-Galea; Martin B Delatycki; Anna Michalska; Jessie Leung; Duncan Crombie; Joseph P Sarsero; Robert Williamson; Mirella Dottori; Alice Pébay
Journal:  Stem Cell Rev Rep       Date:  2011-09       Impact factor: 5.739

Review 2.  Repeat associated non-ATG (RAN) translation: new starts in microsatellite expansion disorders.

Authors:  John Douglas Cleary; Laura P W Ranum
Journal:  Curr Opin Genet Dev       Date:  2014-05-22       Impact factor: 5.578

Review 3.  Friedreich's ataxia: pathology, pathogenesis, and molecular genetics.

Authors:  Arnulf H Koeppen
Journal:  J Neurol Sci       Date:  2011-04-15       Impact factor: 3.181

4.  Deficit of in vivo mitochondrial ATP production in patients with Friedreich ataxia.

Authors:  R Lodi; J M Cooper; J L Bradley; D Manners; P Styles; D J Taylor; A H Schapira
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

5.  Rational selection of small molecules that increase transcription through the GAA repeats found in Friedreich's ataxia.

Authors:  LaKechia Grant; Jun Sun; Hongzhi Xu; S H Subramony; Jonathan B Chaires; Michael D Hebert
Journal:  FEBS Lett       Date:  2006-09-15       Impact factor: 4.124

6.  Progressive GAA.TTC repeat expansion in human cell lines.

Authors:  Scott Ditch; Mimi C Sammarco; Ayan Banerjee; Ed Grabczyk
Journal:  PLoS Genet       Date:  2009-10-30       Impact factor: 5.917

7.  Chromatin structure of two genomic sites for targeted transgene integration in induced pluripotent stem cells and hematopoietic stem cells.

Authors:  R van Rensburg; I Beyer; X-Y Yao; H Wang; O Denisenko; Z-Y Li; D W Russell; D G Miller; P Gregory; M Holmes; K Bomsztyk; A Lieber
Journal:  Gene Ther       Date:  2012-03-22       Impact factor: 5.250

8.  Hyperexpansion of GAA repeats affects post-initiation steps of FXN transcription in Friedreich's ataxia.

Authors:  Eunah Kim; Marek Napierala; Sharon Y R Dent
Journal:  Nucleic Acids Res       Date:  2011-07-10       Impact factor: 16.971

9.  Long intronic GAA*TTC repeats induce epigenetic changes and reporter gene silencing in a molecular model of Friedreich ataxia.

Authors:  E Soragni; D Herman; S Y R Dent; J M Gottesfeld; R D Wells; M Napierala
Journal:  Nucleic Acids Res       Date:  2008-09-27       Impact factor: 16.971

10.  Highly specific contractions of a single CAG/CTG trinucleotide repeat by TALEN in yeast.

Authors:  Guy-Franck Richard; David Viterbo; Varun Khanna; Valentine Mosbach; Lauriane Castelain; Bernard Dujon
Journal:  PLoS One       Date:  2014-04-18       Impact factor: 3.240

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  37 in total

Review 1.  Emerging therapies in Friedreich's ataxia.

Authors:  Tanya V Aranca; Tracy M Jones; Jessica D Shaw; Joseph S Staffetti; Tetsuo Ashizawa; Sheng-Han Kuo; Brent L Fogel; George R Wilmot; Susan L Perlman; Chiadi U Onyike; Sarah H Ying; Theresa A Zesiewicz
Journal:  Neurodegener Dis Manag       Date:  2016

2.  Expanded GAA repeats impede transcription elongation through the FXN gene and induce transcriptional silencing that is restricted to the FXN locus.

Authors:  Yanjie Li; Yue Lu; Urszula Polak; Kevin Lin; Jianjun Shen; Jennifer Farmer; Lauren Seyer; Angela D Bhalla; Natalia Rozwadowska; David R Lynch; Jill Sergesketter Butler; Marek Napierala
Journal:  Hum Mol Genet       Date:  2015-09-23       Impact factor: 6.150

3.  Phosphorus-31 Magnetic Resonance Spectroscopy: A Tool for Measuring In Vivo Mitochondrial Oxidative Phosphorylation Capacity in Human Skeletal Muscle.

Authors:  Vidhya Kumar; Henry Chang; David A Reiter; David P Bradley; Martha Belury; Shana E McCormack; Subha V Raman
Journal:  J Vis Exp       Date:  2017-01-19       Impact factor: 1.355

Review 4.  Modeling simple repeat expansion diseases with iPSC technology.

Authors:  Edyta Jaworska; Emilia Kozlowska; Pawel M Switonski; Wlodzimierz J Krzyzosiak
Journal:  Cell Mol Life Sci       Date:  2016-06-03       Impact factor: 9.261

5.  A CRISPR-Cas9, Cre-lox, and Flp-FRT Cascade Strategy for the Precise and Efficient Integration of Exogenous DNA into Cellular Genomes.

Authors:  Jixue Li; Yanjie Li; Kevin M Pawlik; Jill S Napierala; Marek Napierala
Journal:  CRISPR J       Date:  2020-11-03

Review 6.  Emerging therapies in Friedreich's Ataxia.

Authors:  Theresa A Zesiewicz; Joshua Hancock; Shaila D Ghanekar; Sheng-Han Kuo; Carlos A Dohse; Joshua Vega
Journal:  Expert Rev Neurother       Date:  2020-09-21       Impact factor: 4.618

7.  Progress towards drug discovery for Friedreich's Ataxia: Identifying synthetic oligonucleotides that more potently activate expression of human frataxin protein.

Authors:  Xiulong Shen; Johnathan Wong; Thahza P Prakash; Frank Rigo; Yanjie Li; Marek Napierala; David R Corey
Journal:  Bioorg Med Chem       Date:  2020-04-05       Impact factor: 3.641

8.  Activating frataxin expression by single-stranded siRNAs targeting the GAA repeat expansion.

Authors:  Xiulong Shen; Audrius Kilikevicius; Daniel O'Reilly; Thazha P Prakash; Masad J Damha; Frank Rigo; David R Corey
Journal:  Bioorg Med Chem Lett       Date:  2018-07-21       Impact factor: 2.823

9.  Alleviating GAA Repeat Induced Transcriptional Silencing of the Friedreich's Ataxia Gene During Somatic Cell Reprogramming.

Authors:  Urszula Polak; Yanjie Li; Jill Sergesketter Butler; Marek Napierala
Journal:  Stem Cells Dev       Date:  2016-10-17       Impact factor: 3.272

10.  Stalled DNA Replication Forks at the Endogenous GAA Repeats Drive Repeat Expansion in Friedreich's Ataxia Cells.

Authors:  Jeannine Gerhardt; Angela D Bhalla; Jill Sergesketter Butler; James W Puckett; Peter B Dervan; Zev Rosenwaks; Marek Napierala
Journal:  Cell Rep       Date:  2016-07-14       Impact factor: 9.423

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