Literature DB >> 23229864

Emetine optimally facilitates nascent chain puromycylation and potentiates the ribopuromycylation method (RPM) applied to inert cells.

Alexandre David1, Jack R Bennink, Jonathan W Yewdell.   

Abstract

We previously described the ribopuromyclation method (RPM) to visualize and quantitate translating ribosomes in fixed and permeabilized cells by standard immunofluorescence. RPM is based on puromycylation of nascent chains bound to translating ribosomes followed by detection of puromycylated nascent chains with a puromycin-specific mAb. We now demonstrate that emetine optimally enhances nascent chain puromycylation, and describe a modified RPM protocol for identifying ribosome-bound nascent chains in metabolically inert permeabilized cells.

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Year:  2012        PMID: 23229864      PMCID: PMC3574230          DOI: 10.1007/s00418-012-1063-8

Source DB:  PubMed          Journal:  Histochem Cell Biol        ISSN: 0948-6143            Impact factor:   4.304


  11 in total

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2.  SUnSET, a nonradioactive method to monitor protein synthesis.

Authors:  Enrico K Schmidt; Giovanna Clavarino; Maurizio Ceppi; Philippe Pierre
Journal:  Nat Methods       Date:  2009-03-22       Impact factor: 28.547

3.  RNA binding targets aminoacyl-tRNA synthetases to translating ribosomes.

Authors:  Alexandre David; Nir Netzer; Michael Brad Strader; Suman R Das; Cai Yun Chen; James Gibbs; Philippe Pierre; Jack R Bennink; Jonathan W Yewdell
Journal:  J Biol Chem       Date:  2011-04-01       Impact factor: 5.157

4.  Complexes between nascent polypeptides and their molecular chaperones in the cytosol of mammalian cells.

Authors:  D K Eggers; W J Welch; W J Hansen
Journal:  Mol Biol Cell       Date:  1997-08       Impact factor: 4.138

5.  Inhibitors of protein biosynthesis. V. Effects of emetine on protein and nucleic acid biosynthesis in HeLa cells.

Authors:  A P Grollman
Journal:  J Biol Chem       Date:  1968-08-10       Impact factor: 5.157

6.  Isolation and characterization of puromycin-resistant clones from cultured mosquito cells.

Authors:  A M Fallon; V Stollar
Journal:  Somatic Cell Genet       Date:  1982-07

Review 7.  Inhibitors of ribosome functions.

Authors:  S Pestka
Journal:  Annu Rev Microbiol       Date:  1971       Impact factor: 15.500

8.  Inhibition of reticulocyte peptide-chain initiation by pactamycin: accumulation of inactive ribosomal initiation complexes.

Authors:  L S Kappen; H Suzuki; I H Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  1973-01       Impact factor: 11.205

9.  Structures of five antibiotics bound at the peptidyl transferase center of the large ribosomal subunit.

Authors:  Jeffrey L Hansen; Peter B Moore; Thomas A Steitz
Journal:  J Mol Biol       Date:  2003-07-25       Impact factor: 5.469

10.  Nuclear translation visualized by ribosome-bound nascent chain puromycylation.

Authors:  Alexandre David; Brian P Dolan; Heather D Hickman; Jonathan J Knowlton; Giovanna Clavarino; Philippe Pierre; Jack R Bennink; Jonathan W Yewdell
Journal:  J Cell Biol       Date:  2012-04-02       Impact factor: 10.539

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  19 in total

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Authors:  Sébastien Apcher; Guy Millot; Chrysoula Daskalogianni; Alexander Scherl; Bénédicte Manoury; Robin Fåhraeus
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

2.  Ribopuromycylation in Coronavirus-Infected Cells.

Authors:  Matthew J Brownsword; Helena J Maier; Nicolas Locker
Journal:  Methods Mol Biol       Date:  2020

Review 3.  The Histochem Cell Biol conspectus: the year 2013 in review.

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Journal:  Histochem Cell Biol       Date:  2014-03-09       Impact factor: 4.304

4.  Methods to Classify Cytoplasmic Foci as Mammalian Stress Granules.

Authors:  Anaïs Aulas; Marta M Fay; Witold Szaflarski; Nancy Kedersha; Paul Anderson; Pavel Ivanov
Journal:  J Vis Exp       Date:  2017-05-12       Impact factor: 1.355

5.  Adenylyl cyclase A mRNA localized at the back of cells is actively translated in live chemotaxing Dictyostelium.

Authors:  Weiye Wang; Song Chen; Satarupa Das; Wolfgang Losert; Carole A Parent
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6.  The multi-functional reovirus σ3 protein is a virulence factor that suppresses stress granule formation and is associated with myocardial injury.

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7.  Protein Translation Activity: A New Measure of Host Immune Cell Activation.

Authors:  Mina O Seedhom; Heather D Hickman; Jiajie Wei; Alexandre David; Jonathan W Yewdell
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8.  Genetic removal of p70 S6K1 corrects coding sequence length-dependent alterations in mRNA translation in fragile X syndrome mice.

Authors:  Sameer Aryal; Francesco Longo; Eric Klann
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-04       Impact factor: 11.205

9.  The RiboPuromycylation Method (RPM): an Immunofluorescence Technique to Map Translation Sites at the Sub-cellular Level.

Authors:  Amandine Bastide; Jonathan W Yewdell; Alexandre David
Journal:  Bio Protoc       Date:  2018-01-05

10.  Local translation in nuclear condensate amyloid bodies.

Authors:  Phaedra R Theodoridis; Michael Bokros; Dane Marijan; Nathan C Balukoff; Dazhi Wang; Chloe C Kirk; Taylor D Budine; Harris D Goldsmith; Miling Wang; Timothy E Audas; Stephen Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-16       Impact factor: 11.205

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