Literature DB >> 23226877

Polymers pushing Polymers: Polymer Mixtures in Thermodynamic Equilibrium with a Pore.

R Podgornik1, J Hopkins, V A Parsegian, M Muthukumar.   

Abstract

We investigate polymer partitioning from polymer mixtures into nanometer size cavities by formulating an equation of state for a binary polymer mixture assuming that only one (smaller) of the two polymer components can penetrate the cavity. Deriving the partitioning equilibrium equations and solving them numerically allows us to introduce the concept of "polymers-pushing-polymers" for the action of non-penetrating polymers on the partitioning of the penetrating polymers. Polymer partitioning into a pore even within a very simple model of a binary polymer mixture is shown to depend in a complicated way on the composition of the polymer mixture and/or the pore-penetration penalty. This can lead to enhanced as well as diminished partitioning, due to two separate energy scales that we analyse in detail.

Entities:  

Year:  2012        PMID: 23226877      PMCID: PMC3515646          DOI: 10.1021/ma3017508

Source DB:  PubMed          Journal:  Macromolecules        ISSN: 0024-9297            Impact factor:   5.985


  11 in total

1.  Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

2.  Nonideality of polymer solutions in the pore and concentration-dependent partitioning.

Authors:  Vladimir Yu Zitserman; Alexander M Berezhkovskii; V Adrian Parsegian; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2005-10-08       Impact factor: 3.488

3.  A phenomenological one-parameter equation of state for osmotic pressures of PEG and other neutral flexible polymers in good solvents.

Authors:  J A Cohen; R Podgornik; P L Hansen; V A Parsegian
Journal:  J Phys Chem B       Date:  2009-03-26       Impact factor: 2.991

4.  The force acting on a polymer partially confined in a tube.

Authors:  Peter Prinsen; Li Tai Fang; Aron M Yoffe; Charles M Knobler; William M Gelbart
Journal:  J Phys Chem B       Date:  2009-03-26       Impact factor: 2.991

5.  Partitioning of differently sized poly(ethylene glycol)s into OmpF porin.

Authors:  Tatiana K Rostovtseva; Ekaterina M Nestorovich; Sergey M Bezrukov
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

Review 6.  Biophysics of viral infectivity: matching genome length with capsid size.

Authors:  Elmar Nurmemmedov; Martin Castelnovo; Carlos Enrique Catalano; Alex Evilevitch
Journal:  Q Rev Biophys       Date:  2007-11       Impact factor: 5.318

7.  Osmotic stress for the direct measurement of intermolecular forces.

Authors:  V A Parsegian; R P Rand; N L Fuller; D C Rau
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

8.  Theory for polymer analysis using nanopore-based single-molecule mass spectrometry.

Authors:  Joseph E Reiner; John J Kasianowicz; Brian J Nablo; Joseph W F Robertson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

9.  Single polymer molecules in a protein nanopore in the limit of a strong polymer-pore attraction.

Authors:  Oleg V Krasilnikov; Claudio G Rodrigues; Sergey M Bezrukov
Journal:  Phys Rev Lett       Date:  2006-07-05       Impact factor: 9.161

10.  Osmotic properties of poly(ethylene glycols): quantitative features of brush and bulk scaling laws.

Authors:  Per Lyngs Hansen; Joel A Cohen; Rudi Podgornik; V Adrian Parsegian
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

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  3 in total

1.  Interactions of a Polypeptide with a Protein Nanopore Under Crowding Conditions.

Authors:  Motahareh Ghahari Larimi; Lauren Ashley Mayse; Liviu Movileanu
Journal:  ACS Nano       Date:  2019-04-03       Impact factor: 15.881

2.  Poly(ethylene glycol)s in Semidilute Regime: Radius of Gyration in the Bulk and Partitioning into a Nanopore.

Authors:  Philip A Gurnev; Christopher B Stanley; M Alphan Aksoyoglu; Kunlun Hong; V Adrian Parsegian; Sergey M Bezrukov
Journal:  Macromolecules       Date:  2017-03-09       Impact factor: 5.985

3.  Size-dependent forced PEG partitioning into channels: VDAC, OmpC, and α-hemolysin.

Authors:  M Alphan Aksoyoglu; Rudolf Podgornik; Sergey M Bezrukov; Philip A Gurnev; Murugappan Muthukumar; V Adrian Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-27       Impact factor: 11.205

  3 in total

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