Literature DB >> 19296704

The force acting on a polymer partially confined in a tube.

Peter Prinsen1, Li Tai Fang, Aron M Yoffe, Charles M Knobler, William M Gelbart.   

Abstract

We consider the force acting on a polymer part of whose length is configurationally confined in a tube and the rest of which is free. This situation arises in many different physical contexts, including a flexible synthetic polymer partially confined in a nanopore and a stiff viral genome partially ejected from its capsid. In both cases the force acting to pull the chain molecule out of its confinement is argued to be constant once a few persistence lengths are "free"/"outside". We present Brownian dynamics simulations that confirm the constancy of the force for different chain lengths and illustrate the dependence of the force on the strength of tube confinement. Experimental results are reported for genome ejection from viral capsids, from which we estimate the pulling force to be a few tenths of a piconewton.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19296704     DOI: 10.1021/jp808047u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  4 in total

1.  Mechanochemistry in Translation.

Authors:  Sarah E Leininger; Karthik Narayan; Carol Deutsch; Edward P O'Brien
Journal:  Biochemistry       Date:  2019-06-11       Impact factor: 3.162

2.  Polymers pushing Polymers: Polymer Mixtures in Thermodynamic Equilibrium with a Pore.

Authors:  R Podgornik; J Hopkins; V A Parsegian; M Muthukumar
Journal:  Macromolecules       Date:  2012-10-19       Impact factor: 5.985

3.  Caulobacter chromosome in vivo configuration matches model predictions for a supercoiled polymer in a cell-like confinement.

Authors:  Sun-Hae Hong; Esteban Toro; Kim I Mortensen; Mario A Díaz de la Rosa; Sebastian Doniach; Lucy Shapiro; Andrew J Spakowitz; Harley H McAdams
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-14       Impact factor: 11.205

4.  Effects of pulling forces, osmotic pressure, condensing agents and viscosity on the thermodynamics and kinetics of DNA ejection from bacteriophages to bacterial cells: a computational study.

Authors:  Anton S Petrov; Scott S Douglas; Stephen C Harvey
Journal:  J Phys Condens Matter       Date:  2013-02-12       Impact factor: 2.333

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.