Literature DB >> 23224970

Quantifying Argonaute proteins in and out of GW/P-bodies: implications in microRNA activities.

Anthony K L Leung1, Phillip A Sharp.   

Abstract

MicroRNAs (miRNAs) are a class of ∼22nt non-coding RNAs that regulate the translational potential and stability of mRNAs. Though constituting only 1-4% of human genes, miRNAs are predicted to regulate more than 60% of all mRNAs. The action of miRNAs is mediated through their associations with Argonaute proteins and mRNA targets. Previous studies indicated that though the majority of Argonaute proteins is diffusely distributed in the cytoplasm, a small fraction is consistently observed to be concentrated in a cytoplasmic compartment called GW/P-bodies. In this chapter, we will provide a quantitative and dynamic view of the subcellular localization of miRNA function, followed by a discussion on the possible roles of PBs in miRNA silencing.

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Year:  2013        PMID: 23224970      PMCID: PMC3893129          DOI: 10.1007/978-1-4614-5107-5_10

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  58 in total

1.  Identification of many microRNAs that copurify with polyribosomes in mammalian neurons.

Authors:  John Kim; Anna Krichevsky; Yonatan Grad; Gabriel D Hayes; Kenneth S Kosik; George M Church; Gary Ruvkun
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-22       Impact factor: 11.205

2.  Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies.

Authors:  Muriel Brengues; Daniela Teixeira; Roy Parker
Journal:  Science       Date:  2005-09-01       Impact factor: 47.728

3.  P-body formation is a consequence, not the cause, of RNA-mediated gene silencing.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Daniel Schweizer; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

Review 4.  Stress granules: the Tao of RNA triage.

Authors:  Paul Anderson; Nancy Kedersha
Journal:  Trends Biochem Sci       Date:  2008-03       Impact factor: 13.807

5.  Formation of GW bodies is a consequence of microRNA genesis.

Authors:  Kaleb M Pauley; Theophany Eystathioy; Andrew Jakymiw; John C Hamel; Marvin J Fritzler; Edward K L Chan
Journal:  EMBO Rep       Date:  2006-08-11       Impact factor: 8.807

6.  Prolyl 4-hydroxylation regulates Argonaute 2 stability.

Authors:  Hank H Qi; Pat P Ongusaha; Johanna Myllyharju; Dongmei Cheng; Outi Pakkanen; Yujiang Shi; Sam W Lee; Junmin Peng; Yang Shi
Journal:  Nature       Date:  2008-08-06       Impact factor: 49.962

7.  Mammalian GW182 contains multiple Argonaute-binding sites and functions in microRNA-mediated translational repression.

Authors:  Koji Takimoto; Motoaki Wakiyama; Shigeyuki Yokoyama
Journal:  RNA       Date:  2009-04-27       Impact factor: 4.942

Review 8.  MicroRNAs repress translation of m7Gppp-capped target mRNAs in vitro by inhibiting initiation and promoting deadenylation.

Authors:  Nancy Standart; Richard J Jackson
Journal:  Genes Dev       Date:  2007-08-15       Impact factor: 11.361

9.  Stress granules and processing bodies are dynamically linked sites of mRNP remodeling.

Authors:  Nancy Kedersha; Georg Stoecklin; Maranatha Ayodele; Patrick Yacono; Jens Lykke-Andersen; Marvin J Fritzler; Donalyn Scheuner; Randal J Kaufman; David E Golan; Paul Anderson
Journal:  J Cell Biol       Date:  2005-06-20       Impact factor: 10.539

10.  Silencing by small RNAs is linked to endosomal trafficking.

Authors:  Young Sik Lee; Sigal Pressman; Arlise P Andress; Kevin Kim; Jamie L White; Justin J Cassidy; Xin Li; Kim Lubell; Do Hwan Lim; Ik Sang Cho; Kenji Nakahara; Jonathan B Preall; Priya Bellare; Erik J Sontheimer; Richard W Carthew
Journal:  Nat Cell Biol       Date:  2009-08-16       Impact factor: 28.824

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  20 in total

Review 1.  Stress granules and cell signaling: more than just a passing phase?

Authors:  Nancy Kedersha; Pavel Ivanov; Paul Anderson
Journal:  Trends Biochem Sci       Date:  2013-09-10       Impact factor: 13.807

Review 2.  Biogenesis, turnover, and mode of action of plant microRNAs.

Authors:  Kestrel Rogers; Xuemei Chen
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

3.  Dysregulated RNA-Induced Silencing Complex (RISC) Assembly within CNS Corresponds with Abnormal miRNA Expression during Autoimmune Demyelination.

Authors:  Przemysław Lewkowicz; Hanna Cwiklińska; Marcin P Mycko; Maria Cichalewska; Małgorzata Domowicz; Natalia Lewkowicz; Anna Jurewicz; Krzysztof W Selmaj
Journal:  J Neurosci       Date:  2015-05-13       Impact factor: 6.167

Review 4.  Endogenous microRNA sponges: evidence and controversy.

Authors:  Daniel W Thomson; Marcel E Dinger
Journal:  Nat Rev Genet       Date:  2016-04-04       Impact factor: 53.242

Review 5.  The Whereabouts of microRNA Actions: Cytoplasm and Beyond.

Authors:  Anthony K L Leung
Journal:  Trends Cell Biol       Date:  2015-10       Impact factor: 20.808

6.  Circulating miRNAs: cell-cell communication function?

Authors:  A Turchinovich; T R Samatov; A G Tonevitsky; B Burwinkel
Journal:  Front Genet       Date:  2013-06-28       Impact factor: 4.599

Review 7.  MicroRNAs in B-cells: from normal differentiation to treatment of malignancies.

Authors:  Sara Correia Marques; Maria Bach Laursen; Julie Støve Bødker; Malene Krag Kjeldsen; Steffen Falgreen; Alexander Schmitz; Martin Bøgsted; Hans Erik Johnsen; Karen Dybkaer
Journal:  Oncotarget       Date:  2015-01-01

8.  P-body assembly requires DDX6 repression complexes rather than decay or Ataxin2/2L complexes.

Authors:  Jessica Ayache; Marianne Bénard; Michèle Ernoult-Lange; Nicola Minshall; Nancy Standart; Michel Kress; Dominique Weil
Journal:  Mol Biol Cell       Date:  2015-05-20       Impact factor: 4.138

Review 9.  miRNAs regulated by estrogens, tamoxifen, and endocrine disruptors and their downstream gene targets.

Authors:  Carolyn M Klinge
Journal:  Mol Cell Endocrinol       Date:  2015-02-03       Impact factor: 4.102

10.  AGO2 localizes to cytokinetic protrusions in a p38-dependent manner and is needed for accurate cell division.

Authors:  Vasiliki I Pantazopoulou; Anastasios D Delis; Stella Georgiou; Stamatis N Pagakis; Vicky Filippa; Eleni Dragona; Ismini Kloukina; Elias Chatzitheodoridis; Jonel Trebicka; Athanassios D Velentzas; Maja Thiele; Sarantis Gagos; Dimitris Thanos; Sofia Tseleni-Balafouta; Dimitrios J Stravopodis; Ema Anastasiadou
Journal:  Commun Biol       Date:  2021-06-11
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