Literature DB >> 23223527

Microfluidic Western blotting.

Alex J Hughes1, Amy E Herr.   

Abstract

Rapid, quantitative Western blotting is a long-sought bioanalytical goal in the life sciences. To this end, we describe a Western blotting assay conducted in a single glass microchannel under purely electronic control. The μWestern blot is comprised of multiple steps: sample enrichment, protein sizing, protein immobilization (blotting), and in situ antibody probing. To validate the microfluidic assay, we apply the μWestern blot to analyses of human sera (HIV immunoreactivity) and cell lysate (NFκB). Analytical performance advances are achieved, including: short durations of 10-60 min, multiplexed analyte detection, mass sensitivity at the femtogram level, high-sensitivity 50-pM detection limits, and quantitation capability over a 3.6-log dynamic range. Performance gains are attributed to favorable transport and reaction conditions on the microscale. The multistep assay design relies on a photopatternable (blue light) and photoreactive (UV light) polyacrylamide gel. This hydrophilic polymer constitutes both a separation matrix for protein sizing and, after brief UV exposure, a protein immobilization scaffold for subsequent antibody probing of immobilized protein bands. We observe protein capture efficiencies exceeding 75% under sizing conditions. This compact microfluidic design supports demonstration of a 48-plex μWestern blot in a standard microscope slide form factor. Taken together, the μWestern blot establishes a foundation for rapid, targeted proteomics by merging exceptional specificity with the throughput advantages of multiplexing, as is relevant to a broad range of biological inquiry.

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Year:  2012        PMID: 23223527      PMCID: PMC3535594          DOI: 10.1073/pnas.1207754110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Blotting efficiency investigated by using two-dimensional electrophoresis, hydrophobic membranes and proteins from different sources.

Authors:  P Jungblut; C Eckerskorn; F Lottspeich; J Klose
Journal:  Electrophoresis       Date:  1990-07       Impact factor: 3.535

2.  Detecting protein-protein interactions by Far western blotting.

Authors:  Yuliang Wu; Qiang Li; Xing-Zhen Chen
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  Photopolymerized diffusion-defined polyacrylamide gradient gels for on-chip protein sizing.

Authors:  Catherine T Lo; Daniel J Throckmorton; Anup K Singh; Amy E Herr
Journal:  Lab Chip       Date:  2008-06-13       Impact factor: 6.799

4.  Homogeneous immunosubtraction integrated with sample preparation enabled by a microfluidic format.

Authors:  Akwasi A Apori; Amy E Herr
Journal:  Anal Chem       Date:  2011-03-04       Impact factor: 6.986

5.  Microfluidic integration for automated targeted proteomic assays.

Authors:  Alex J Hughes; Robert K C Lin; Donna M Peehl; Amy E Herr
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

6.  Interpretation and use of the western blot assay for serodiagnosis of human immunodeficiency virus type 1 infections.

Authors: 
Journal:  MMWR Suppl       Date:  1989-07-21

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

Review 8.  Benzophenone photophores in biochemistry.

Authors:  G Dormán; G D Prestwich
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

9.  Matrix-insensitive protein assays push the limits of biosensors in medicine.

Authors:  Richard S Gaster; Drew A Hall; Carsten H Nielsen; Sebastian J Osterfeld; Heng Yu; Kathleen E Mach; Robert J Wilson; Boris Murmann; Joseph C Liao; Sanjiv S Gambhir; Shan X Wang
Journal:  Nat Med       Date:  2009-10-11       Impact factor: 53.440

10.  Application of protein lysate microarrays to molecular marker verification and quantification.

Authors:  Anitha Ramaswamy; E Lin; Iou Chen; Rahul Mitra; Joel Morrisett; Kevin Coombes; Zhenlin Ju; Mini Kapoor
Journal:  Proteome Sci       Date:  2005-11-10       Impact factor: 2.480

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  43 in total

Review 1.  Protein immobilization techniques for microfluidic assays.

Authors:  Dohyun Kim; Amy E Herr
Journal:  Biomicrofluidics       Date:  2013-07-30       Impact factor: 2.800

2.  Proximity ligation assay for high-content profiling of cell signaling pathways on a microfluidic chip.

Authors:  Matthias Blazek; Charles Betz; Michael Nip Hall; Michael Reth; Roland Zengerle; Matthias Meier
Journal:  Mol Cell Proteomics       Date:  2013-09-26       Impact factor: 5.911

3.  Multiplexed Western Blotting Using Microchip Electrophoresis.

Authors:  Shi Jin; Michael D Furtaw; Huaxian Chen; Don T Lamb; Stephen A Ferguson; Natalie E Arvin; Mohamed Dawod; Robert T Kennedy
Journal:  Anal Chem       Date:  2016-06-16       Impact factor: 6.986

4.  Integration of programmable microfluidics and on-chip fluorescence detection for biosensing applications.

Authors:  J W Parks; M A Olson; J Kim; D Ozcelik; H Cai; R Carrion; J L Patterson; R A Mathies; A R Hawkins; H Schmidt
Journal:  Biomicrofluidics       Date:  2014-09-30       Impact factor: 2.800

5.  Recent advances in the analysis of therapeutic proteins by capillary and microchip electrophoresis.

Authors:  Jessica S Creamer; Nathan J Oborny; Susan M Lunte
Journal:  Anal Methods       Date:  2014-07-08       Impact factor: 2.896

6.  Digital microfluidic assay for protein detection.

Authors:  Janine Mok; Michael N Mindrinos; Ronald W Davis; Mehdi Javanmard
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

7.  Laminated microfluidic system for small sample protein analysis.

Authors:  Sara Saedinia; Kent L Nastiuk; John J Krolewski; G P Li; Mark Bachman
Journal:  Biomicrofluidics       Date:  2014-02-13       Impact factor: 2.800

8.  Kinetic Analysis of Enzymes Immobilized in Porous Film Arrays.

Authors:  Hector D Neira; Amy E Herr
Journal:  Anal Chem       Date:  2017-09-14       Impact factor: 6.986

9.  Single cell-resolution western blotting.

Authors:  Chi-Chih Kang; Kevin A Yamauchi; Julea Vlassakis; Elly Sinkala; Todd A Duncombe; Amy E Herr
Journal:  Nat Protoc       Date:  2016-07-28       Impact factor: 13.491

10.  Western blotting using microchip electrophoresis interfaced to a protein capture membrane.

Authors:  Shi Jin; Gwendolyn J Anderson; Robert T Kennedy
Journal:  Anal Chem       Date:  2013-05-28       Impact factor: 6.986

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