Literature DB >> 8180191

Benzophenone photophores in biochemistry.

G Dormán1, G D Prestwich.   

Abstract

The photoactivatable aryl ketone derivatives have been rediscovered as biochemical probes in the last 5 years. The expanding use of benzophenone (BP) photoprobes can be attributed to three distinct chemical and biochemical advantages. First, BPs are chemically more stable than diazo esters, aryl azides, and diazirines. Second, BPs can be manipulated in ambient light and can be activated at 350-360 nm, avoiding protein-damaging wavelengths. Third, BPs react preferentially with unreactive C-H bonds, even in the presence of solvent water and bulk nucleophiles. These three properties combine to produce highly efficient covalent modifications of macromolecules, frequently with remarkable site specificity. This Perspectives includes a brief review of BP photochemistry and a selection of specific applications of these photoprobes, which address questions in protein, nucleic acid, and lipid biochemistry.

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Year:  1994        PMID: 8180191     DOI: 10.1021/bi00185a001

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  180 in total

1.  Chemistry for the analysis of protein-protein interactions: rapid and efficient cross-linking triggered by long wavelength light.

Authors:  D A Fancy; T Kodadek
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

2.  A model of troponin-I in complex with troponin-C using hybrid experimental data: the inhibitory region is a beta-hairpin.

Authors:  C S Tung; M E Wall; S C Gallagher; J Trewhella
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

3.  Photoaffinity labeling of Ras converting enzyme using peptide substrates that incorporate benzoylphenylalanine (Bpa) residues: improved labeling and structural implications.

Authors:  Kelly Kyro; Surya P Manandhar; Daniel Mullen; Walter K Schmidt; Mark D Distefano
Journal:  Bioorg Med Chem       Date:  2011-10-18       Impact factor: 3.641

4.  Conformation-dependent hydrophobic photolabeling of the nicotinic receptor: electrophysiology-coordinated photochemistry and mass spectrometry.

Authors:  John F Leite; Michael P Blanton; Mona Shahgholi; Dennis A Dougherty; Henry A Lester
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-20       Impact factor: 11.205

5.  Studies on the function of oligosaccharyl transferase subunits: a glycosylatable photoprobe binds to the luminal domain of Ost1p.

Authors:  Qi Yan; William J Lennarz
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-20       Impact factor: 11.205

6.  Probing the conformation of the ISWI ATPase domain with genetically encoded photoreactive crosslinkers and mass spectrometry.

Authors:  Ignasi Forné; Johanna Ludwigsen; Axel Imhof; Peter B Becker; Felix Mueller-Planitz
Journal:  Mol Cell Proteomics       Date:  2011-12-13       Impact factor: 5.911

7.  Structure of the human angiotensin II type 1 (AT1) receptor bound to angiotensin II from multiple chemoselective photoprobe contacts reveals a unique peptide binding mode.

Authors:  Dany Fillion; Jérôme Cabana; Gaétan Guillemette; Richard Leduc; Pierre Lavigne; Emanuel Escher
Journal:  J Biol Chem       Date:  2013-02-05       Impact factor: 5.157

Review 8.  Incorporation of Non-Canonical Amino Acids.

Authors:  Lilia Leisle; Francis Valiyaveetil; Ryan A Mehl; Christopher A Ahern
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

9.  Intersubunit cross-talk in pyridoxal 5'-phosphate synthase, coordinated by the C terminus of the synthase subunit.

Authors:  Thomas Raschle; Davide Speziga; Wolfgang Kress; Cyril Moccand; Peter Gehrig; Nikolaus Amrhein; Eilika Weber-Ban; Teresa B Fitzpatrick
Journal:  J Biol Chem       Date:  2008-12-14       Impact factor: 5.157

10.  A comparative study of ATP analogs for phosphorylation-dependent kinase-substrate crosslinking.

Authors:  Satish Garre; Chamara Senevirathne; Mary Kay H Pflum
Journal:  Bioorg Med Chem       Date:  2014-01-30       Impact factor: 3.641

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