Literature DB >> 23223445

The chemical synthesis of DNA/RNA: our gift to science.

Marvin H Caruthers1.   

Abstract

It is a great privilege to contribute to the Reflections essays. In my particular case, this essay has allowed me to weave some of my major scientific contributions into a tapestry held together by what I have learned from three colleagues (Robert Letsinger, Gobind Khorana, and George Rathmann) who molded my career at every important junction. To these individuals, I remain eternally grateful, as they always led by example and showed many of us how to break new ground in both science and biotechnology. Relative to my scientific career, I have focused primarily on two related areas. The first is methodologies we developed for chemically synthesizing DNA and RNA. Synthetic DNA and RNA continue to be an essential research tool for biologists, biochemists, and molecular biologists. The second is developing new approaches for solving important biological problems using synthetic DNA, RNA, and their analogs.

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Year:  2012        PMID: 23223445      PMCID: PMC3543024          DOI: 10.1074/jbc.X112.442855

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  OLIGONUCLEOTIDE SYNTHESIS ON A POLYMER SUPPORT.

Authors:  R L LETSINGER; V MAHADEVAN
Journal:  J Am Chem Soc       Date:  1965-08-05       Impact factor: 15.419

2.  Role of the Cro repressor carboxy-terminal domain and flexible dimer linkage in operator and nonspecific DNA binding.

Authors:  A J Hubbard; L P Bracco; S J Eisenbeis; R B Gayle; G Beaton; M H Caruthers
Journal:  Biochemistry       Date:  1990-10-02       Impact factor: 3.162

3.  Streamlined process for the chemical synthesis of RNA using 2'-O-thionocarbamate-protected nucleoside phosphoramidites in the solid phase.

Authors:  Douglas J Dellinger; Zoltán Timár; Joel Myerson; Agnieszka B Sierzchala; John Turner; Fernando Ferreira; Zoltán Kupihár; Geraldine Dellinger; Kenneth W Hill; James A Powell; Jeffrey R Sampson; Marvin H Caruthers
Journal:  J Am Chem Soc       Date:  2011-07-11       Impact factor: 15.419

4.  How lac repressor recognizes lac operator.

Authors:  D V Goeddel; D G Yansura; M H Caruthers
Journal:  Proc Natl Acad Sci U S A       Date:  1978-08       Impact factor: 11.205

5.  DNA functional groups required for formation of open complexes between Escherichia coli RNA polymerase and the lambda PR promoter. Identification via base analog substitutions.

Authors:  J W Dubendorff; P L deHaseth; M S Rosendahl; M H Caruthers
Journal:  J Biol Chem       Date:  1987-01-15       Impact factor: 5.157

6.  Studies on polynucleotides. 103. Total synthesis of the structural gene for an alanine transfer ribonucleic acid from yeast.

Authors:  H G Khorana; K L Agarwal; H Büchi; M H Caruthers; N K Gupta; K Kleppe; A Kumar; E Otsuka; U L RajBhandary; J H Van de Sande; V Sgaramella; T Terao; H Weber; T Yamada
Journal:  J Mol Biol       Date:  1972-12-28       Impact factor: 5.469

Review 7.  Synthesis in the study of nucleic acids. The Fourth Jubilee Lecture.

Authors:  H G Khorana
Journal:  Biochem J       Date:  1968-10       Impact factor: 3.857

8.  Reactions of nucleosides on polymer supports. Synthesis of thymidylylthymidylylthymidine.

Authors:  R L Letsinger; M H Caruthers; D M Jerina
Journal:  Biochemistry       Date:  1967-05       Impact factor: 3.162

9.  Oligonucleotide syntheses utilizing beta-benzoylpropionyl, a blocking group with a trigger for selective cleavage.

Authors:  R L Letsinger; M H Caruthers; P S Miller; K K Ogilvie
Journal:  J Am Chem Soc       Date:  1967-12-20       Impact factor: 15.419

10.  Synthesis of high-quality libraries of long (150mer) oligonucleotides by a novel depurination controlled process.

Authors:  Emily M LeProust; Bill J Peck; Konstantin Spirin; Heather Brummel McCuen; Bridget Moore; Eugeni Namsaraev; Marvin H Caruthers
Journal:  Nucleic Acids Res       Date:  2010-03-22       Impact factor: 16.971

  10 in total
  16 in total

1.  Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA.

Authors:  Yu Liu; Erik Holmstrom; Ping Yu; Kemin Tan; Xiaobing Zuo; David J Nesbitt; Rui Sousa; Jason R Stagno; Yun-Xing Wang
Journal:  Nat Protoc       Date:  2018-04-12       Impact factor: 13.491

2.  De novo DNA synthesis using polymerase-nucleotide conjugates.

Authors:  Sebastian Palluk; Daniel H Arlow; Tristan de Rond; Sebastian Barthel; Justine S Kang; Rathin Bector; Hratch M Baghdassarian; Alisa N Truong; Peter W Kim; Anup K Singh; Nathan J Hillson; Jay D Keasling
Journal:  Nat Biotechnol       Date:  2018-06-18       Impact factor: 54.908

3.  DNA Dendrons as Agents for Intracellular Delivery.

Authors:  Max E Distler; Michelle H Teplensky; Katherine E Bujold; Caroline D Kusmierz; Michael Evangelopoulos; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2021-08-19       Impact factor: 16.383

4.  A P(V) platform for oligonucleotide synthesis.

Authors:  Yazhong Huang; Kyle W Knouse; Shenjie Qiu; Wei Hao; Natalia M Padial; Julien C Vantourout; Bin Zheng; Stephen E Mercer; Javier Lopez-Ogalla; Rohan Narayan; Richard E Olson; Donna G Blackmond; Martin D Eastgate; Michael A Schmidt; Ivar M McDonald; Phil S Baran
Journal:  Science       Date:  2021-09-09       Impact factor: 63.714

Review 5.  Uncertainties in synthetic DNA-based data storage.

Authors:  Chengtao Xu; Chao Zhao; Biao Ma; Hong Liu
Journal:  Nucleic Acids Res       Date:  2021-06-04       Impact factor: 16.971

6.  Nucleic Acid Aptamers as Potential Therapeutic and Diagnostic Agents for Lymphoma.

Authors:  Ka-To Shum; Jiehua Zhou; John J Rossi
Journal:  J Cancer Ther       Date:  2013-06-01

Review 7.  Applications of Ruthenium Complexes Covalently Linked to Nucleic Acid Derivatives.

Authors:  Marie Flamme; Emma Clarke; Gilles Gasser; Marcel Hollenstein
Journal:  Molecules       Date:  2018-06-22       Impact factor: 4.411

Review 8.  Synthetic mRNA capping.

Authors:  Fabian Muttach; Nils Muthmann; Andrea Rentmeister
Journal:  Beilstein J Org Chem       Date:  2017-12-20       Impact factor: 2.883

9.  Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3' Terminal Structures for Enzymatic De Novo DNA Synthesis.

Authors:  Sebastian Barthel; Sebastian Palluk; Nathan J Hillson; Jay D Keasling; Daniel H Arlow
Journal:  Genes (Basel)       Date:  2020-01-16       Impact factor: 4.096

Review 10.  Current and Emerging Methods for the Synthesis of Single-Stranded DNA.

Authors:  Min Hao; Jianjun Qiao; Hao Qi
Journal:  Genes (Basel)       Date:  2020-01-21       Impact factor: 4.096

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