Literature DB >> 21688829

Streamlined process for the chemical synthesis of RNA using 2'-O-thionocarbamate-protected nucleoside phosphoramidites in the solid phase.

Douglas J Dellinger1, Zoltán Timár, Joel Myerson, Agnieszka B Sierzchala, John Turner, Fernando Ferreira, Zoltán Kupihár, Geraldine Dellinger, Kenneth W Hill, James A Powell, Jeffrey R Sampson, Marvin H Caruthers.   

Abstract

An improved method for the chemical synthesis of RNA was developed utilizing a streamlined method for the preparation of phosphoramidite monomers and a single-step deprotection of the resulting oligoribonucleotide product using 1,2-diamines under anhydrous conditions. The process is compatible with most standard heterobase protection and employs a 2'-O-(1,1-dioxo-1λ(6)-thiomorpholine-4-carbothioate) as a unique 2'-hydroxyl protective group. Using this approach, it was demonstrated that the chemical synthesis of RNA can be as simple and robust as the chemical synthesis of DNA.

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Year:  2011        PMID: 21688829     DOI: 10.1021/ja201561z

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Ribosomal Protein L11 Selectively Stabilizes a Tertiary Structure of the GTPase Center rRNA Domain.

Authors:  Robb Welty; Michael Rau; Suzette Pabit; Mark S Dunstan; Graeme L Conn; Lois Pollack; Kathleen B Hall
Journal:  J Mol Biol       Date:  2019-12-24       Impact factor: 5.469

2.  Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells.

Authors:  Ayal Hendel; Rasmus O Bak; Joseph T Clark; Andrew B Kennedy; Daniel E Ryan; Subhadeep Roy; Israel Steinfeld; Benjamin D Lunstad; Robert J Kaiser; Alec B Wilkens; Rosa Bacchetta; Anya Tsalenko; Douglas Dellinger; Laurakay Bruhn; Matthew H Porteus
Journal:  Nat Biotechnol       Date:  2015-06-29       Impact factor: 54.908

Review 3.  CRISPR-derived genome editing therapies: Progress from bench to bedside.

Authors:  Holly A Rees; Alex C Minella; Cameron A Burnett; Alexis C Komor; Nicole M Gaudelli
Journal:  Mol Ther       Date:  2021-10-05       Impact factor: 11.454

4.  Nucleobases Undergo Dynamic Rearrangements during RNA Tertiary Folding.

Authors:  Robb Welty; Kathleen B Hall
Journal:  J Mol Biol       Date:  2016-09-29       Impact factor: 5.469

5.  The chemical synthesis of DNA/RNA: our gift to science.

Authors:  Marvin H Caruthers
Journal:  J Biol Chem       Date:  2012-12-06       Impact factor: 5.157

6.  Formation of Tertiary Interactions during rRNA GTPase Center Folding.

Authors:  Michael J Rau; Robb Welty; W Tom Stump; Kathleen B Hall
Journal:  J Mol Biol       Date:  2015-07-22       Impact factor: 5.469

7.  An Unconventional Acid-Labile Nucleobase Protection Concept for Guanosine Phosphoramidites in RNA Solid-Phase Synthesis.

Authors:  Lukas Jud; Ronald Micura
Journal:  Chemistry       Date:  2017-02-09       Impact factor: 5.236

8.  Improving CRISPR-Cas specificity with chemical modifications in single-guide RNAs.

Authors:  Daniel E Ryan; David Taussig; Israel Steinfeld; Smruti M Phadnis; Benjamin D Lunstad; Madhurima Singh; Xuan Vuong; Kenji D Okochi; Ryan McCaffrey; Magdalena Olesiak; Subhadeep Roy; Chong Wing Yung; Bo Curry; Jeffrey R Sampson; Laurakay Bruhn; Douglas J Dellinger
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

9.  Base-cleavable microarrays for the characterization of DNA and RNA oligonucleotides synthesized in situ by photolithography.

Authors:  Jory Lietard; Nicole Kretschy; Matej Sack; Alexander S Wahba; Mark M Somoza; Masad J Damha
Journal:  Chem Commun (Camb)       Date:  2014-11-04       Impact factor: 6.222

10.  Conjugation and Evaluation of Triazole-Linked Single Guide RNA for CRISPR-Cas9 Gene Editing.

Authors:  Kaizhang He; Eldon T Chou; Shawn Begay; Emily M Anderson; Anja van Brabant Smith
Journal:  Chembiochem       Date:  2016-08-19       Impact factor: 3.164

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