Literature DB >> 23222781

Can genomics boost productivity of orphan crops?

Rajeev K Varshney1, Jean-Marcel Ribaut, Edward S Buckler, Roberto Tuberosa, J Antoni Rafalski, Peter Langridge.   

Abstract

Mesh：

Year:  2012        PMID： 23222781     DOI： 10.1038/nbt.2440

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  34 in total

1.  Next-generation sequencing technologies: opportunities and obligations in plant genomics.

Authors:  Rajeev K Varshney; Gregory D May
Journal:  Brief Funct Genomics       Date:  2012-01       Impact factor: 4.241

2.  Genome-wide association studies of 14 agronomic traits in rice landraces.

Authors:  Xuehui Huang; Xinghua Wei; Tao Sang; Qiang Zhao; Qi Feng; Yan Zhao; Canyang Li; Chuanrang Zhu; Tingting Lu; Zhiwu Zhang; Meng Li; Danlin Fan; Yunli Guo; Ahong Wang; Lu Wang; Liuwei Deng; Wenjun Li; Yiqi Lu; Qijun Weng; Kunyan Liu; Tao Huang; Taoying Zhou; Yufeng Jing; Wei Li; Zhang Lin; Edward S Buckler; Qian Qian; Qi-Fa Zhang; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2010-10-24       Impact factor: 38.330

3.  Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize.

Authors:  Silvio Salvi; Giorgio Sponza; Michele Morgante; Dwight Tomes; Xiaomu Niu; Kevin A Fengler; Robert Meeley; Evgueni V Ananiev; Sergei Svitashev; Edward Bruggemann; Bailin Li; Christine F Hainey; Slobodanka Radovic; Giusi Zaina; J-Antoni Rafalski; Scott V Tingey; Guo-Hua Miao; Ronald L Phillips; Roberto Tuberosa
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-26       Impact factor: 11.205

Review 4.  Orphan legume crops enter the genomics era!

Authors:  Rajeev K Varshney; Timothy J Close; Nagendra K Singh; David A Hoisington; Douglas R Cook
Journal:  Curr Opin Plant Biol       Date:  2009-01-20       Impact factor: 7.834

5.  Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond.

Authors:  Endang M Septiningsih; Alvaro M Pamplona; Darlene L Sanchez; Chirravuri N Neeraja; Georgina V Vergara; Sigrid Heuer; Abdelbagi M Ismail; David J Mackill
Journal:  Ann Bot       Date:  2008-10-30       Impact factor: 4.357

Review 6.  Agricultural biotechnology for crop improvement in a variable climate: hope or hype?

Authors:  Rajeev K Varshney; Kailash C Bansal; Pramod K Aggarwal; Swapan K Datta; Peter Q Craufurd
Journal:  Trends Plant Sci       Date:  2011-04-15       Impact factor: 18.313

Review 7.  Seed banks and molecular maps: unlocking genetic potential from the wild.

Authors:  S D Tanksley; S R McCouch
Journal:  Science       Date:  1997-08-22       Impact factor: 47.728

8.  Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm.

Authors:  Xuehui Huang; Yan Zhao; Xinghua Wei; Canyang Li; Ahong Wang; Qiang Zhao; Wenjun Li; Yunli Guo; Liuwei Deng; Chuanrang Zhu; Danlin Fan; Yiqi Lu; Qijun Weng; Kunyan Liu; Taoying Zhou; Yufeng Jing; Lizhen Si; Guojun Dong; Tao Huang; Tingting Lu; Qi Feng; Qian Qian; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2011-12-04       Impact factor: 38.330

9.  Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes.

Authors:  Xun Xu; Xin Liu; Song Ge; Jeffrey D Jensen; Fengyi Hu; Xin Li; Yang Dong; Ryan N Gutenkunst; Lin Fang; Lei Huang; Jingxiang Li; Weiming He; Guojie Zhang; Xiaoming Zheng; Fumin Zhang; Yingrui Li; Chang Yu; Karsten Kristiansen; Xiuqing Zhang; Jian Wang; Mark Wright; Susan McCouch; Rasmus Nielsen; Jun Wang; Wen Wang
Journal:  Nat Biotechnol       Date:  2011-12-11       Impact factor: 54.908

10.  An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations.

Authors:  Vincent Segura; Bjarni J Vilhjálmsson; Alexander Platt; Arthur Korte; Ümit Seren; Quan Long; Magnus Nordborg
Journal:  Nat Genet       Date:  2012-06-17       Impact factor: 38.330
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  71 in total

Review 1.  Sustainable intensification in agricultural systems.

Authors:  Jules Pretty; Zareen Pervez Bharucha
Journal:  Ann Bot       Date:  2014-10-28       Impact factor: 4.357

Review 2.  Sequencing consolidates molecular markers with plant breeding practice.

Authors:  Huaan Yang; Chengdao Li; Hon-Ming Lam; Jonathan Clements; Guijun Yan; Shancen Zhao
Journal:  Theor Appl Genet       Date:  2015-03-28       Impact factor: 5.699

3.  Detection of subgenome bias using an anchored syntenic approach in Eleusine coracana (finger millet).

Authors:  Nathan D Hall; Jinesh D Patel; J Scott McElroy; Leslie R Goertzen
Journal:  BMC Genomics       Date:  2021-03-12       Impact factor: 3.969

4.  Biochemical diversity evaluation in chickpea accessions employing mini-core collection.

Authors:  Sameer Suresh Bhagyawant; Ajay Kumar Gautam; Dakshita Tanaji Narvekar; Neha Gupta; Amita Bhadkaria; Nidhi Srivastava; Hari D Upadhyaya
Journal:  Physiol Mol Biol Plants       Date:  2018-07-23

5.  The zinc-finger transcription factor ZAT6 is essential for hydrogen peroxide induction of anthocyanin synthesis in Arabidopsis.

Authors:  Haitao Shi; Guoyin Liu; Yunxie Wei; Zhulong Chan
Journal:  Plant Mol Biol       Date:  2018-04-19       Impact factor: 4.076

Review 6.  Applying evolutionary biology to address global challenges.

Authors:  Scott P Carroll; Peter Søgaard Jørgensen; Michael T Kinnison; Carl T Bergstrom; R Ford Denison; Peter Gluckman; Thomas B Smith; Sharon Y Strauss; Bruce E Tabashnik
Journal:  Science       Date:  2014-09-11       Impact factor: 47.728

Review 7.  Modernising breeding for orphan crops: tools, methodologies, and beyond.

Authors:  Jean-Marcel Ribaut; Michel Ragot
Journal:  Planta       Date:  2019-06-29       Impact factor: 4.116

Review 8.  Speed breeding orphan crops.

Authors:  Tinashe Chiurugwi; Stuart Kemp; Wayne Powell; Lee T Hickey
Journal:  Theor Appl Genet       Date:  2018-10-19       Impact factor: 5.699

Review 9.  Breeding approaches and genomics technologies to increase crop yield under low-temperature stress.

Authors:  Uday Chand Jha; Abhishek Bohra; Rintu Jha
Journal:  Plant Cell Rep       Date:  2016-11-22       Impact factor: 4.570

10.  Use of modern tomato breeding germplasm for deciphering the genetic control of agronomical traits by Genome Wide Association study.

Authors:  Guillaume Bauchet; Stéphane Grenier; Nicolas Samson; Julien Bonnet; Laurent Grivet; Mathilde Causse
Journal:  Theor Appl Genet       Date:  2017-02-10       Impact factor: 5.699
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