Literature DB >> 27878342

Breeding approaches and genomics technologies to increase crop yield under low-temperature stress.

Uday Chand Jha1, Abhishek Bohra2, Rintu Jha3.   

Abstract

KEY MESSAGE: Improved knowledge about plant cold stress tolerance offered by modern omics technologies will greatly inform future crop improvement strategies that aim to breed cultivars yielding substantially high under low-temperature conditions. Alarmingly rising temperature extremities present a substantial impediment to the projected target of 70% more food production by 2050. Low-temperature (LT) stress severely constrains crop production worldwide, thereby demanding an urgent yet sustainable solution. Considerable research progress has been achieved on this front. Here, we review the crucial cellular and metabolic alterations in plants that follow LT stress along with the signal transduction and the regulatory network describing the plant cold tolerance. The significance of plant genetic resources to expand the genetic base of breeding programmes with regard to cold tolerance is highlighted. Also, the genetic architecture of cold tolerance trait as elucidated by conventional QTL mapping and genome-wide association mapping is described. Further, global expression profiling techniques including RNA-Seq along with diverse omics platforms are briefly discussed to better understand the underlying mechanism and prioritize the candidate gene (s) for downstream applications. These latest additions to breeders' toolbox hold immense potential to support plant breeding schemes that seek development of LT-tolerant cultivars. High-yielding cultivars endowed with greater cold tolerance are urgently required to sustain the crop yield under conditions severely challenged by low-temperature.

Entities:  

Keywords:  Cold tolerance; Genetic resource; Genomics; QTL

Mesh:

Year:  2016        PMID: 27878342     DOI: 10.1007/s00299-016-2073-0

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  266 in total

1.  Genetic dissection of the temperature dependent emergence processes in sorghum using a cumulative emergence model and stability parameters.

Authors:  Karin Fiedler; Wubishet A Bekele; Wolfgang Friedt; Rod Snowdon; Hartmut Stützel; Arndt Zacharias; Ralf Uptmoor
Journal:  Theor Appl Genet       Date:  2012-07-31       Impact factor: 5.699

2.  AtHAP5A modulates freezing stress resistance in Arabidopsis independent of the CBF pathway.

Authors:  Haitao Shi; Zhu-Long Chan
Journal:  Plant Signal Behav       Date:  2014

3.  Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.

Authors:  Klára Kosová; Pavel Vítámvás; Sébastien Planchon; Jenny Renaut; Radomíra Vanková; Ilja Tom Prášil
Journal:  J Proteome Res       Date:  2013-09-18       Impact factor: 4.466

4.  Genetic variability and QTL mapping of freezing tolerance and related traits in Medicago truncatula.

Authors:  Komlan Avia; Marie-Laure Pilet-Nayel; Nasser Bahrman; Alain Baranger; Bruno Delbreil; Véronique Fontaine; Céline Hamon; Eric Hanocq; Martine Niarquin; Hélène Sellier; Christophe Vuylsteker; Jean-Marie Prosperi; Isabelle Lejeune-Hénaut
Journal:  Theor Appl Genet       Date:  2013-06-19       Impact factor: 5.699

5.  Mapping of quantitative trait loci controlling low-temperature germinability in rice (Oryza sativa L.).

Authors:  K Fujino; H Sekiguchi; T Sato; H Kiuchi; Y Nonoue; Y Takeuchi; T Ando; S Y Lin; M Yano
Journal:  Theor Appl Genet       Date:  2003-11-18       Impact factor: 5.699

6.  Large deletions in the CBF gene cluster at the Fr-B2 locus are associated with reduced frost tolerance in wheat.

Authors:  Stephen Pearce; Jie Zhu; Ákos Boldizsár; Attila Vágújfalvi; Adrienne Burke; Kimberley Garland-Campbell; Gábor Galiba; Jorge Dubcovsky
Journal:  Theor Appl Genet       Date:  2013-07-25       Impact factor: 5.699

7.  Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis.

Authors:  Jeffrey S Skinner; Péter Szucs; Jarislav von Zitzewitz; Luis Marquez-Cedillo; Tanya Filichkin; Eric J Stockinger; Michael F Thomashow; Tony H H Chen; Patrick M Hayes
Journal:  Theor Appl Genet       Date:  2005-12-20       Impact factor: 5.574

8.  Genetic architecture of winter hardiness and frost tolerance in triticale.

Authors:  Wenxin Liu; Hans Peter Maurer; Guoliang Li; Matthew R Tucker; Manje Gowda; Elmar A Weissmann; Volker Hahn; Tobias Würschum
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

9.  Cold signaling and cold response in plants.

Authors:  Kenji Miura; Tsuyoshi Furumoto
Journal:  Int J Mol Sci       Date:  2013-03-06       Impact factor: 5.923

10.  A major quantitative trait locus for cold-responsive gene expression is linked to frost-resistance gene Fr-A2 in common wheat.

Authors:  Yoichi Motomura; Fuminori Kobayashi; Julio C M Iehisa; Shigeo Takumi
Journal:  Breed Sci       Date:  2013-03-01       Impact factor: 2.086

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  16 in total

1.  A calcium sensor calcineurin B-like 9 negatively regulates cold tolerance via calcium signaling in Arabidopsis thaliana.

Authors:  Yuanlin Gao; Guozeng Zhang
Journal:  Plant Signal Behav       Date:  2019-01-29

2.  Mobile ARGONAUTE 1d binds 22-nt miRNAs to generate phasiRNAs important for low-temperature male fertility in rice.

Authors:  Fuyan Si; Haofei Luo; Chao Yang; Jie Gong; Bin Yan; Chunyan Liu; Xianwei Song; Xiaofeng Cao
Journal:  Sci China Life Sci       Date:  2022-10-11       Impact factor: 10.372

3.  Cold-inducible MaC2H2s are associated with cold stress response of banana fruit via regulating MaICE1.

Authors:  Yan-Chao Han; Chang-Chun Fu
Journal:  Plant Cell Rep       Date:  2019-03-02       Impact factor: 4.570

Review 4.  Primary Structure Analysis of Antifungal Peptides from Cultivated and Wild Cereals.

Authors:  Eugene Rogozhin; Dmitry Ryazantsev; Alexey Smirnov; Sergey Zavriev
Journal:  Plants (Basel)       Date:  2018-09-12

Review 5.  Marker-assisted selection in rice breeding programs in Hokkaido.

Authors:  Kenji Fujino; Yuji Hirayama; Ryota Kaji
Journal:  Breed Sci       Date:  2019-07-24       Impact factor: 2.086

Review 6.  Cold Stress in Wheat: Plant Acclimation Responses and Management Strategies.

Authors:  Muhammad A Hassan; Chen Xiang; Muhammad Farooq; Noor Muhammad; Zhang Yan; Xu Hui; Ke Yuanyuan; Attiogbe K Bruno; Zhang Lele; Li Jincai
Journal:  Front Plant Sci       Date:  2021-07-08       Impact factor: 5.753

Review 7.  Chilling and Drought Stresses in Crop Plants: Implications, Cross Talk, and Potential Management Opportunities.

Authors:  Hafiz A Hussain; Saddam Hussain; Abdul Khaliq; Umair Ashraf; Shakeel A Anjum; Shengnan Men; Longchang Wang
Journal:  Front Plant Sci       Date:  2018-04-10       Impact factor: 5.753

8.  Automated phenotyping for early vigour of field pea seedlings in controlled environment by colour imaging technology.

Authors:  Giao N Nguyen; Sally L Norton; Garry M Rosewarne; Laura E James; Anthony T Slater
Journal:  PLoS One       Date:  2018-11-19       Impact factor: 3.240

9.  Evaluation of Switchgrass Genotypes for Cold-Tolerant Seed Germination from Native Populations in the Northeast USA.

Authors:  Hilary Mayton; Masoume Amirkhani; Michael Loos; Jamie Crawford; Ryan Crawford; Julie Hansen; Donald Viands; Paul Salon; Alan Taylor
Journal:  Plants (Basel)       Date:  2019-10-02

Review 10.  Long non-coding RNAs: emerging players regulating plant abiotic stress response and adaptation.

Authors:  Uday Chand Jha; Harsh Nayyar; Rintu Jha; Muhammad Khurshid; Meiliang Zhou; Nitin Mantri; Kadambot H M Siddique
Journal:  BMC Plant Biol       Date:  2020-10-12       Impact factor: 4.215

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