Literature DB >> 23216378

Small-angle X-ray scattering on biological macromolecules and nanocomposites in solution.

Clement E Blanchet1, Dmitri I Svergun.   

Abstract

Small-angle X-ray scattering (SAXS) is a powerful method to study the structural properties of materials at the nanoscale. Recent progress in instrumentation and analysis methods has led to rapidly growing applications of this technique for the characterization of biological macromolecules in solution. Ab initio and rigid-body modeling methods allow one to build three-dimensional, low-resolution models from SAXS data. With the new approaches, oligomeric states of proteins and macromolecular complexes can be assessed, chemical equilibria and kinetic reactions can be studied, and even flexible objects such as intrinsically unfolded proteins can be quantitatively characterized. This review describes the analysis methods of SAXS data from macromolecular solutions, ranging from the computation of overall structural parameters to advanced three-dimensional modeling. The efficiency of these methods is illustrated by recent applications to biological macromolecules and nanocomposite particles.

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Year:  2012        PMID: 23216378     DOI: 10.1146/annurev-physchem-040412-110132

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  60 in total

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Journal:  Protein Sci       Date:  2016-01-12       Impact factor: 6.725

2.  Molecular weight-gyration radius relation of globular proteins: a comparison of light scattering, small-angle X-ray scattering and structure-based data.

Authors:  Detlef-M Smilgies; Ewa Folta-Stogniew
Journal:  J Appl Crystallogr       Date:  2015-09-20       Impact factor: 3.304

3.  Conformational plasticity of the essential membrane-associated mannosyltransferase PimA from mycobacteria.

Authors:  David Giganti; Jorge Alegre-Cebollada; Saioa Urresti; David Albesa-Jové; Ane Rodrigo-Unzueta; Natalia Comino; Michael Kachala; Sonia López-Fernández; Dmitri I Svergun; Julio M Fernández; Marcelo E Guerin
Journal:  J Biol Chem       Date:  2013-08-20       Impact factor: 5.157

4.  The dimeric ectodomain of the alkali-sensing insulin receptor-related receptor (ectoIRR) has a droplike shape.

Authors:  Eleonora V Shtykova; Maxim V Petoukhov; Andrey A Mozhaev; Igor E Deyev; Liubov A Dadinova; Nikita A Loshkarev; Alexander S Goryashchenko; Eduard V Bocharov; Cy M Jeffries; Dmitri I Svergun; Oleg V Batishchev; Alexander G Petrenko
Journal:  J Biol Chem       Date:  2019-10-15       Impact factor: 5.157

5.  Accurate small and wide angle x-ray scattering profiles from atomic models of proteins and nucleic acids.

Authors:  Hung T Nguyen; Suzette A Pabit; Steve P Meisburger; Lois Pollack; David A Case
Journal:  J Chem Phys       Date:  2014-12-14       Impact factor: 3.488

6.  Cross-Validation of Data Compatibility Between Small Angle X-ray Scattering and Cryo-Electron Microscopy.

Authors:  Jin Seob Kim; Bijan Afsari; Gregory S Chirikjian
Journal:  J Comput Biol       Date:  2016-10-06       Impact factor: 1.479

7.  Examining Membrane Proteins by Neutron Scattering.

Authors:  Christine Ebel; Cécile Breyton; Anne Martel
Journal:  Methods Mol Biol       Date:  2020

Review 8.  A review of multi-domain and flexible molecular chaperones studies by small-angle X-ray scattering.

Authors:  Júlio C Borges; Thiago V Seraphim; Paulo R Dores-Silva; Leandro R S Barbosa
Journal:  Biophys Rev       Date:  2016-03-04

9.  Molecular Cloning and Characterization of a (Lys)6-Tagged Sulfide-Reactive Hemoglobin I from Lucina pectinata.

Authors:  Ramonita Díaz-Ayala; Andrés Moya-Rodríguez; Ruth Pietri; Carmen L Cadilla; Juan López-Garriga
Journal:  Mol Biotechnol       Date:  2015-12       Impact factor: 2.695

10.  Local DNA Sequence Controls Asymmetry of DNA Unwrapping from Nucleosome Core Particles.

Authors:  Alexander W Mauney; Joshua M Tokuda; Lisa M Gloss; Oscar Gonzalez; Lois Pollack
Journal:  Biophys J       Date:  2018-07-31       Impact factor: 4.033

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