Literature DB >> 26482241

Molecular Cloning and Characterization of a (Lys)6-Tagged Sulfide-Reactive Hemoglobin I from Lucina pectinata.

Ramonita Díaz-Ayala, Andrés Moya-Rodríguez, Ruth Pietri, Carmen L Cadilla, Juan López-Garriga.   

Abstract

A poly-Lys tag was fused to the Lucina pectinata hemoglobin I (HbI) coding sequence and purified using an efficient and fast process. HbI is a hemeprotein that binds hydrogen sulfide (H2S) with high affinity and it has been used to understand physiologically relevant reactions of this signaling molecule. The (Lys)6-tagged rHbI construct was expressed in E. coli and purified by immobilization on a cation exchange matrix, followed by size-exclusion chromatography. The identity, structure, and function of the (Lys)6-tagged rHbI were assessed by mass spectrometry, small and wide X-ray scattering, optical spectroscopy, and kinetic analysis. The scattering and spectroscopic results showed that the (Lys)6-tagged rHbI is structurally and functionally analogous to the native protein as well as to the (His)6-tagged rHbI. Kinetics studies with H2S indicated that the association (k on) and dissociation (k off) rate constants were 1.4 × 10(5)/M/s and 0.1 × 10(-3)/s, respectively. This results confirmed that the (Lys)6-tagged rHbI binds H2S with the same high affinity as its homologue.

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Year:  2015        PMID: 26482241      PMCID: PMC4937220          DOI: 10.1007/s12033-015-9896-8

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  37 in total

1.  Determination of domain structure of proteins from X-ray solution scattering.

Authors:  D I Svergun; M V Petoukhov; M H Koch
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

Review 2.  Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems.

Authors:  K Terpe
Journal:  Appl Microbiol Biotechnol       Date:  2002-11-07       Impact factor: 4.813

Review 3.  Structural characterization of proteins and complexes using small-angle X-ray solution scattering.

Authors:  Haydyn D T Mertens; Dmitri I Svergun
Journal:  J Struct Biol       Date:  2010-06-15       Impact factor: 2.867

4.  Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.

Authors:  Gilbert S Omenn; David J States; Marcin Adamski; Thomas W Blackwell; Rajasree Menon; Henning Hermjakob; Rolf Apweiler; Brian B Haab; Richard J Simpson; James S Eddes; Eugene A Kapp; Robert L Moritz; Daniel W Chan; Alex J Rai; Arie Admon; Ruedi Aebersold; Jimmy Eng; William S Hancock; Stanley A Hefta; Helmut Meyer; Young-Ki Paik; Jong-Shin Yoo; Peipei Ping; Joel Pounds; Joshua Adkins; Xiaohong Qian; Rong Wang; Valerie Wasinger; Chi Yue Wu; Xiaohang Zhao; Rong Zeng; Alexander Archakov; Akira Tsugita; Ilan Beer; Akhilesh Pandey; Michael Pisano; Philip Andrews; Harald Tammen; David W Speicher; Samir M Hanash
Journal:  Proteomics       Date:  2005-08       Impact factor: 3.984

5.  Sulfide-binding hemoglobins: Effects of mutations on active-site flexibility.

Authors:  S Fernandez-Alberti; D E Bacelo; R C Binning; J Echave; M Chergui; J Lopez-Garriga
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

6.  Recombinant hemoglobin II from Lucina pectinata: a large-scale method for hemeprotein expression in E. coli.

Authors:  Cacimar Ramos; Ruth Pietri; Wilmarie Lorenzo; Elddie Roman; Laura B Granell; Carmen L Cadilla; Juan López-Garriga
Journal:  Protein J       Date:  2010-02       Impact factor: 2.371

7.  Characterization of polycationic amino acids fusion systems for ion-exchange purification of cyclodextrin glycosyltransferase from recombinant Escherichia coli.

Authors:  Dae-Hyuk Kweon; Dae-Hee Lee; Nam-Soo Han; Chan-Su Rha; Jin-Ho Seo
Journal:  Biotechnol Prog       Date:  2002 Mar-Apr

8.  Presenting your structures: the CCP4mg molecular-graphics software.

Authors:  S McNicholas; E Potterton; K S Wilson; M E M Noble
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  I-TASSER server for protein 3D structure prediction.

Authors:  Yang Zhang
Journal:  BMC Bioinformatics       Date:  2008-01-23       Impact factor: 3.169

Review 10.  Fusion tags for protein solubility, purification and immunogenicity in Escherichia coli: the novel Fh8 system.

Authors:  Sofia Costa; André Almeida; António Castro; Lucília Domingues
Journal:  Front Microbiol       Date:  2014-02-19       Impact factor: 5.640

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  3 in total

Review 1.  Chemical Biology of H2S Signaling through Persulfidation.

Authors:  Milos R Filipovic; Jasmina Zivanovic; Beatriz Alvarez; Ruma Banerjee
Journal:  Chem Rev       Date:  2017-11-07       Impact factor: 60.622

2.  Engineered (Lys)6-Tagged Recombinant Sulfide-Reactive Hemoglobin I for Covalent Immobilization at Multiwalled Carbon Nanotubes.

Authors:  Ramonita Díaz-Ayala; Lisa Torres-González; Ruth Pietri; Carlos R Cabrera; Juan López-Garriga
Journal:  ACS Omega       Date:  2017-12-15

3.  Characterization of Recombinant His-Tag Protein Immobilized onto Functionalized Gold Nanoparticles.

Authors:  Lisa Torres-González; Ramonita Díaz-Ayala; Carmen A Vega-Olivencia; Juan López-Garriga
Journal:  Sensors (Basel)       Date:  2018-12-04       Impact factor: 3.576

  3 in total

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