Literature DB >> 23212213

New insights into plastid nucleoid structure and functionality.

Karin Krupinska1, Joanna Melonek, Kirsten Krause.   

Abstract

Investigations over many decades have revealed that nucleoids of higher plant plastids are highly dynamic with regard to their number, their structural organization and protein composition. Membrane attachment and environmental cues seem to determine the activity and functionality of the nucleoids and point to a highly regulated structure-function relationship. The heterogeneous composition and the many functions that are seemingly associated with the plastid nucleoids could be related to the high number of chromosomes per plastid. Recent proteomic studies have brought novel nucleoid-associated proteins into the spotlight and indicated that plastid nucleoids are an evolutionary hybrid possessing prokaryotic nucleoid features and eukaryotic (nuclear) chromatin components, several of which are dually targeted to the nucleus and chloroplasts. Future studies need to unravel if and how plastid-nucleus communication depends on nucleoid structure and plastid gene expression.

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Year:  2012        PMID: 23212213     DOI: 10.1007/s00425-012-1817-5

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  101 in total

Review 1.  Organization, developmental dynamics, and evolution of plastid nucleoids.

Authors:  Naoki Sato; Kimihiro Terasawa; Kazunori Miyajima; Yukihiro Kabeya
Journal:  Int Rev Cytol       Date:  2003

2.  Affinity purification of the tobacco plastid RNA polymerase and in vitro reconstitution of the holoenzyme.

Authors:  Jon Y Suzuki; A Jimmy Ytterberg; Thomas A Beardslee; Lori A Allison; Klaas Jan Wijk; Pal Maliga
Journal:  Plant J       Date:  2004-10       Impact factor: 6.417

3.  Recombinant Whirly1 translocates from transplastomic chloroplasts to the nucleus.

Authors:  Rena Isemer; Maria Mulisch; Anke Schäfer; Stefan Kirchner; Hans-Ulrich Koop; Karin Krupinska
Journal:  FEBS Lett       Date:  2011-12-03       Impact factor: 4.124

4.  Whirly1 in chloroplasts associates with intron containing RNAs and rarely co-localizes with nucleoids.

Authors:  Joanna Melonek; Maria Mulisch; Christian Schmitz-Linneweber; Evelyn Grabowski; Götz Hensel; Karin Krupinska
Journal:  Planta       Date:  2010-05-16       Impact factor: 4.116

5.  Plastid DNA synthesis and nucleic acid-binding proteins in developing barley chloroplasts.

Authors:  B J Baumgartner; J E Mullet
Journal:  J Photochem Photobiol B       Date:  1991-11       Impact factor: 6.252

Review 6.  The RNA-recognition motif in chloroplasts.

Authors:  Hannes Ruwe; Christiane Kupsch; Marlene Teubner; Christian Schmitz-Linneweber
Journal:  J Plant Physiol       Date:  2011-02-16       Impact factor: 3.549

7.  DNA Methylation Occurred around Lowly Expressed Genes of Plastid DNA during Tomato Fruit Development.

Authors:  J Ngernprasirtsiri; H Kobayashi; T Akazawa
Journal:  Plant Physiol       Date:  1988-09       Impact factor: 8.340

8.  Steam-girdling of barley (Hordeum vulgare) leaves leads to carbohydrate accumulation and accelerated leaf senescence, facilitating transcriptomic analysis of senescence-associated genes.

Authors:  David L Parrott; Kate McInnerney; Urs Feller; Andreas M Fischer
Journal:  New Phytol       Date:  2007       Impact factor: 10.151

9.  Structure, composition, and distribution of plastid nucleoids in Narcissus pseudonarcissus.

Authors:  P Hansmann; H Falk; K Ronai; P Sitte
Journal:  Planta       Date:  1985-07       Impact factor: 4.116

10.  Transcriptional regulation and DNA methylation in plastids during transitional conversion of chloroplasts to chromoplasts.

Authors:  H Kobayashi; J Ngernprasirtsiri; T Akazawa
Journal:  EMBO J       Date:  1990-02       Impact factor: 11.598

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  18 in total

Review 1.  The plastid transcription machinery and its coordination with the expression of nuclear genome: Plastid-Encoded Polymerase, Nuclear-Encoded Polymerase and the Genomes Uncoupled 1-mediated retrograde communication.

Authors:  Luca Tadini; Nicolaj Jeran; Carlotta Peracchio; Simona Masiero; Monica Colombo; Paolo Pesaresi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-05-04       Impact factor: 6.237

2.  WSL3, a component of the plastid-encoded plastid RNA polymerase, is essential for early chloroplast development in rice.

Authors:  Liwei Wang; Chunming Wang; Yihua Wang; Mei Niu; Yulong Ren; Kunneng Zhou; Huan Zhang; Qibing Lin; Fuqing Wu; Zhijun Cheng; Jiulin Wang; Xin Zhang; Xiuping Guo; Ling Jiang; Cailin Lei; Jie Wang; Shanshan Zhu; Zhichao Zhao; Jianmin Wan
Journal:  Plant Mol Biol       Date:  2016-08-29       Impact factor: 4.076

Review 3.  A Series of Fortunate Events: Introducing Chlamydomonas as a Reference Organism.

Authors:  Patrice A Salomé; Sabeeha S Merchant
Journal:  Plant Cell       Date:  2019-06-12       Impact factor: 11.277

4.  WHIRLY1 Functions in the Control of Responses to Nitrogen Deficiency But Not Aphid Infestation in Barley.

Authors:  Gloria Comadira; Brwa Rasool; Barbara Kaprinska; Belén Márquez García; Jennifer Morris; Susan R Verrall; Micha Bayer; Peter E Hedley; Robert D Hancock; Christine H Foyer
Journal:  Plant Physiol       Date:  2015-05-05       Impact factor: 8.340

Review 5.  Understanding chloroplast biogenesis using second-site suppressors of immutans and var2.

Authors:  Aarthi Putarjunan; Xiayan Liu; Trevor Nolan; Fei Yu; Steve Rodermel
Journal:  Photosynth Res       Date:  2013-05-24       Impact factor: 3.573

6.  The nucleoid-associated protein WHIRLY1 is required for the coordinate assembly of plastid and nucleus-encoded proteins during chloroplast development.

Authors:  Karin Krupinska; Susanne Braun; Monireh Saeid Nia; Anke Schäfer; Götz Hensel; Wolfgang Bilger
Journal:  Planta       Date:  2019-01-11       Impact factor: 4.116

7.  WHIRLY1 is a major organizer of chloroplast nucleoids.

Authors:  Karin Krupinska; Svenja Oetke; Christine Desel; Maria Mulisch; Anke Schäfer; Julien Hollmann; Jochen Kumlehn; Götz Hensel
Journal:  Front Plant Sci       Date:  2014-09-04       Impact factor: 5.753

8.  Opposite roles of the Arabidopsis cytokinin receptors AHK2 and AHK3 in the expression of plastid genes and genes for the plastid transcriptional machinery during senescence.

Authors:  Maria N Danilova; Natalia V Kudryakova; Anastasia S Doroshenko; Dmitry A Zabrodin; Zulfira F Rakhmankulova; Ralf Oelmüller; Victor V Kusnetsov
Journal:  Plant Mol Biol       Date:  2017-02-01       Impact factor: 4.076

Review 9.  DNA maintenance in plastids and mitochondria of plants.

Authors:  Delene J Oldenburg; Arnold J Bendich
Journal:  Front Plant Sci       Date:  2015-10-29       Impact factor: 5.753

Review 10.  Chloroplast evolution, structure and functions.

Authors:  Poul Erik Jensen; Dario Leister
Journal:  F1000Prime Rep       Date:  2014-06-02
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