Literature DB >> 23188308

Improved Fourier-based characterization of intracellular fractal features.

Joanna Xylas1, Kyle P Quinn, Martin Hunter, Irene Georgakoudi.   

Abstract

A novel Fourier-based image analysis method for measuring fractal features is presented which can significantly reduce artifacts due to non-fractal edge effects. The technique is broadly applicable to the quantitative characterization of internal morphology (texture) of image features with well-defined borders. In this study, we explore the capacity of this method for quantitative assessment of intracellular fractal morphology of mitochondrial networks in images of normal and diseased (precancerous) epithelial tissues. Using a combination of simulated fractal images and endogenous two-photon excited fluorescence (TPEF) microscopy, our method is shown to more accurately characterize the exponent of the high-frequency power spectral density (PSD) of these images in the presence of artifacts that arise due to cellular and nuclear borders.

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Year:  2012        PMID: 23188308      PMCID: PMC3601639          DOI: 10.1364/OE.20.023442

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  27 in total

1.  Live tissue intrinsic emission microscopy using multiphoton-excited native fluorescence and second harmonic generation.

Authors:  Warren R Zipfel; Rebecca M Williams; Richard Christie; Alexander Yu Nikitin; Bradley T Hyman; Watt W Webb
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2.  Scale-invariant behavior and vascular network formation in normal and tumor tissue.

Authors: 
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3.  Tissue self-affinity and polarized light scattering in the born approximation: a new model for precancer detection.

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Journal:  Phys Rev Lett       Date:  2006-09-28       Impact factor: 9.161

4.  Ultrastructural bases for metabolically linked mechanical activity in mitochondria. I. Reversible ultrastructural changes with change in metabolic steady state in isolated liver mitochondria.

Authors:  C R Hackenbrock
Journal:  J Cell Biol       Date:  1966-08       Impact factor: 10.539

5.  Light scattering measurements of subcellular structure provide noninvasive early detection of chemotherapy-induced apoptosis.

Authors:  Kevin J Chalut; Julie Hanson Ostrander; Michael G Giacomelli; Adam Wax
Journal:  Cancer Res       Date:  2009-01-13       Impact factor: 12.701

6.  Two-photon microscopy for non-invasive, quantitative monitoring of stem cell differentiation.

Authors:  William L Rice; David L Kaplan; Irene Georgakoudi
Journal:  PLoS One       Date:  2010-04-16       Impact factor: 3.240

7.  Characterization of metabolic changes associated with the functional development of 3D engineered tissues by non-invasive, dynamic measurement of individual cell redox ratios.

Authors:  Kyle P Quinn; Evangelia Bellas; Nikolaos Fourligas; Kyongbum Lee; David L Kaplan; Irene Georgakoudi
Journal:  Biomaterials       Date:  2012-05-04       Impact factor: 12.479

8.  Nonscalar elastic light scattering from continuous random media in the Born approximation.

Authors:  Jeremy D Rogers; Ilker R Capoğlu; Vadim Backman
Journal:  Opt Lett       Date:  2009-06-15       Impact factor: 3.776

9.  Oxidative phosphorylation and ultrastructural transformation in mitochondria in the intact ascites tumor cell.

Authors:  C R Hackenbrock; T G Rehn; E C Weinbach; J J Lemasters
Journal:  J Cell Biol       Date:  1971-10       Impact factor: 10.539

10.  Ultrastructural bases for metabolically linked mechanical activity in mitochondria. II. Electron transport-linked ultrastructural transformations in mitochondria.

Authors:  C R Hackenbrock
Journal:  J Cell Biol       Date:  1968-05       Impact factor: 10.539

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  18 in total

1.  Rapid quantification of mitochondrial fractal dimension in individual cells.

Authors:  Isaac Vargas; Kinan Alhallak; Olivia I Kolenc; Samir V Jenkins; Robert J Griffin; Ruud P M Dings; Narasimhan Rajaram; Kyle P Quinn
Journal:  Biomed Opt Express       Date:  2018-10-09       Impact factor: 3.732

2.  Noninvasive assessment of mitochondrial organization in three-dimensional tissues reveals changes associated with cancer development.

Authors:  Joanna Xylas; Antonio Varone; Kyle P Quinn; Dimitra Pouli; Margaret E McLaughlin-Drubin; Hong-Thao Thieu; Maria L Garcia-Moliner; Michael House; Martin Hunter; Karl Munger; Irene Georgakoudi
Journal:  Int J Cancer       Date:  2014-06-05       Impact factor: 7.396

Review 3.  Evaluating Cell Metabolism Through Autofluorescence Imaging of NAD(P)H and FAD.

Authors:  Olivia I Kolenc; Kyle P Quinn
Journal:  Antioxid Redox Signal       Date:  2018-01-30       Impact factor: 8.401

4.  Tissue Imaging and Quantification Relying on Endogenous Contrast.

Authors:  Zhiyi Liu; Jia Meng; Kyle P Quinn; Irene Georgakoudi
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

5.  Imaging mitochondrial dynamics in human skin reveals depth-dependent hypoxia and malignant potential for diagnosis.

Authors:  Dimitra Pouli; Mihaela Balu; Carlo A Alonzo; Zhiyi Liu; Kyle P Quinn; Francisca Rius-Diaz; Ronald M Harris; Kristen M Kelly; Bruce J Tromberg; Irene Georgakoudi
Journal:  Sci Transl Med       Date:  2016-11-30       Impact factor: 17.956

6.  Quantitative characterization of mineralized silk film remodeling during long-term osteoblast-osteoclast co-culture.

Authors:  Rebecca S Hayden; Kyle P Quinn; Carlo A Alonzo; Irene Georgakoudi; David L Kaplan
Journal:  Biomaterials       Date:  2014-01-29       Impact factor: 12.479

7.  Non-invasive monitoring of cell metabolism and lipid production in 3D engineered human adipose tissues using label-free multiphoton microscopy.

Authors:  Tyler Chang; Maxwell S Zimmerley; Kyle P Quinn; Isabelle Lamarre-Jouenne; David L Kaplan; Emmanuel Beaurepaire; Irene Georgakoudi
Journal:  Biomaterials       Date:  2013-08-09       Impact factor: 12.479

8.  Two-photon images reveal unique texture features for label-free identification of ovarian cancer peritoneal metastases.

Authors:  Dimitra Pouli; Elizabeth M Genega; Travis B Sullivan; Kimberly M Rieger-Christ; Valena Wright; Irene Georgakoudi; Thomas Schnelldorfer
Journal:  Biomed Opt Express       Date:  2019-08-06       Impact factor: 3.562

9.  Label-free two-photon imaging of mitochondrial activity in murine macrophages stimulated with bacterial and viral ligands.

Authors:  Christian Harry Allen; Duale Ahmed; Olivia Raiche-Tanner; Vinita Chauhan; Leila Mostaço-Guidolin; Edana Cassol; Sangeeta Murugkar
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

10.  Spatial frequency metrics for analysis of microscopic images of musculoskeletal tissues.

Authors:  Kayvan Forouhesh Tehrani; Emily G Pendleton; W Michael Southern; Jarrod A Call; Luke J Mortensen
Journal:  Connect Tissue Res       Date:  2020-10-07       Impact factor: 3.417

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