Literature DB >> 30460127

Rapid quantification of mitochondrial fractal dimension in individual cells.

Isaac Vargas1, Kinan Alhallak1, Olivia I Kolenc1, Samir V Jenkins2, Robert J Griffin2, Ruud P M Dings2, Narasimhan Rajaram1, Kyle P Quinn1.   

Abstract

An improved technique for fractal characterization called the modified blanket method is introduced that can quantify surrounding fractal structures on a pixel by pixel basis without artifacts associated with scale-dependent image features such as object size. The method interprets images as topographical maps, obtaining information regarding the local surface area as a function of image resolution. Local fractal dimension (FD) can be quantified from the power law exponent derived from the surface area and image resolution relationship. We apply this technique on simulated cell images of known FD and compared the obtained values to power spectral density (PSD) analysis. Our method is sensitive to a wider FD range (2.0-4.5), having a mean error of 1.4% compared to 6% for PSD analysis. This increased sensitivity and an ability to compute regional FD properties enabled the discrimination of the differences in radiation resistant cancer cell responses that could not be detected using PSD analysis.

Entities:  

Year:  2018        PMID: 30460127      PMCID: PMC6238904          DOI: 10.1364/BOE.9.005269

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  25 in total

1.  Estimation of the 3D self-similarity parameter of trabecular bone from its 2D projection.

Authors:  Rachid Jennane; Rachid Harba; Gérald Lemineur; Stéphanie Bretteil; Anne Estrade; Claude Laurent Benhamou
Journal:  Med Image Anal       Date:  2006-12-22       Impact factor: 8.545

2.  Improved Fourier-based characterization of intracellular fractal features.

Authors:  Joanna Xylas; Kyle P Quinn; Martin Hunter; Irene Georgakoudi
Journal:  Opt Express       Date:  2012-10-08       Impact factor: 3.894

3.  Characterisation of mammographic parenchymal pattern by fractal dimension.

Authors:  C B Caldwell; S J Stapleton; D W Holdsworth; R A Jong; W J Weiser; G Cooke; M J Yaffe
Journal:  Phys Med Biol       Date:  1990-02       Impact factor: 3.609

4.  Fractal nature of regional myocardial blood flow heterogeneity.

Authors:  J B Bassingthwaighte; R B King; S A Roger
Journal:  Circ Res       Date:  1989-09       Impact factor: 17.367

Review 5.  Evaluating Cell Metabolism Through Autofluorescence Imaging of NAD(P)H and FAD.

Authors:  Olivia I Kolenc; Kyle P Quinn
Journal:  Antioxid Redox Signal       Date:  2018-01-30       Impact factor: 8.401

6.  The application of fractal analysis to mammographic tissue classification.

Authors:  C E Priebe; J L Solka; R A Lorey; G W Rogers; W L Poston; M Kallergi; W Qian; L P Clarke; R A Clark
Journal:  Cancer Lett       Date:  1994-03-15       Impact factor: 8.679

7.  Mapping metabolic changes by noninvasive, multiparametric, high-resolution imaging using endogenous contrast.

Authors:  Zhiyi Liu; Dimitra Pouli; Carlo A Alonzo; Antonio Varone; Sevasti Karaliota; Kyle P Quinn; Karl Münger; Katia P Karalis; Irene Georgakoudi
Journal:  Sci Adv       Date:  2018-03-07       Impact factor: 14.136

Review 8.  The Concerted Action of Mitochondrial Dynamics and Positioning: New Characters in Cancer Onset and Progression.

Authors:  Diana Pendin; Riccardo Filadi; Paola Pizzo
Journal:  Front Oncol       Date:  2017-05-22       Impact factor: 6.244

9.  Multifractal framework based on blanket method.

Authors:  Milorad P Paskaš; Irini S Reljin; Branimir D Reljin
Journal:  ScientificWorldJournal       Date:  2014-01-22

10.  A Radiosensitizing Inhibitor of HIF-1 alters the Optical Redox State of Human Lung Cancer Cells In Vitro.

Authors:  David E Lee; Kinan Alhallak; Samir V Jenkins; Isaac Vargas; Nicholas P Greene; Kyle P Quinn; Robert J Griffin; Ruud P M Dings; Narasimhan Rajaram
Journal:  Sci Rep       Date:  2018-06-11       Impact factor: 4.379

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  3 in total

Review 1.  The Mitochondrion as an Emerging Therapeutic Target in Cancer.

Authors:  Katherine G Roth; Isa Mambetsariev; Prakash Kulkarni; Ravi Salgia
Journal:  Trends Mol Med       Date:  2019-07-18       Impact factor: 11.951

Review 2.  Label-Free Multiphoton Microscopy for the Detection and Monitoring of Calcific Aortic Valve Disease.

Authors:  Ishita Tandon; Kyle P Quinn; Kartik Balachandran
Journal:  Front Cardiovasc Med       Date:  2021-06-11

Review 3.  Optical Imaging Approaches to Investigating Radiation Resistance.

Authors:  Sina Dadgar; Narasimhan Rajaram
Journal:  Front Oncol       Date:  2019-11-05       Impact factor: 6.244

  3 in total

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