Literature DB >> 23170954

Getting in shape: controlling peptide bioactivity and bioavailability using conformational constraints.

Jonathan E Bock1, Jason Gavenonis1, Joshua A Kritzer1.   

Abstract

Chemical biologists commonly seek out correlations between the physicochemical properties of molecules and their behavior in biological systems. However, a new paradigm is emerging for peptides in which conformation is recognized as the primary determinant of bioactivity and bioavailability. This review highlights an emerging body of work that directly addresses how a peptide's conformation controls its biological effects, cell penetration, and intestinal absorption. Based on this work, the dream of mimicking the potency and bioavailability of natural product peptides is getting closer to reality.

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Year:  2012        PMID: 23170954      PMCID: PMC4847942          DOI: 10.1021/cb300515u

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  124 in total

1.  Improvement of oral peptide bioavailability: Peptidomimetics and prodrug strategies.

Authors: 
Journal:  Adv Drug Deliv Rev       Date:  1997-09-15       Impact factor: 15.470

2.  Probing the alpha-helical structural stability of stapled p53 peptides: molecular dynamics simulations and analysis.

Authors:  Zuojun Guo; Udayan Mohanty; Justin Noehre; Tomi K Sawyer; Woody Sherman; Goran Krilov
Journal:  Chem Biol Drug Des       Date:  2010-04       Impact factor: 2.817

3.  Conformational flexibility, internal hydrogen bonding, and passive membrane permeability: successful in silico prediction of the relative permeabilities of cyclic peptides.

Authors:  Taha Rezai; Jonathan E Bock; Mai V Zhou; Chakrapani Kalyanaraman; R Scott Lokey; Matthew P Jacobson
Journal:  J Am Chem Soc       Date:  2006-11-01       Impact factor: 15.419

Review 4.  The design of guanidinium-rich transporters and their internalization mechanisms.

Authors:  Paul A Wender; Wesley C Galliher; Elena A Goun; Lisa R Jones; Thomas H Pillow
Journal:  Adv Drug Deliv Rev       Date:  2007-11-09       Impact factor: 15.470

5.  Conformationally restricted bicyclic analogs of somatostatin.

Authors:  D F Veber; F W Holly; W J Paleveda; R F Nutt; S J Bergstrand; M Torchiana; M S Glitzer; R Saperstein; R Hirschmann
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

Review 6.  The exploration of macrocycles for drug discovery--an underexploited structural class.

Authors:  Edward M Driggers; Stephen P Hale; Jinbo Lee; Nicholas K Terrett
Journal:  Nat Rev Drug Discov       Date:  2008-07       Impact factor: 84.694

Review 7.  Peptidomimetics, a synthetic tool of drug discovery.

Authors:  Josef Vagner; Hongchang Qu; Victor J Hruby
Journal:  Curr Opin Chem Biol       Date:  2008-05-14       Impact factor: 8.822

8.  Alpha-conotoxin Vc1.1 alleviates neuropathic pain and accelerates functional recovery of injured neurones.

Authors:  Narmatha Satkunanathan; Bruce Livett; Ken Gayler; David Sandall; John Down; Zeinab Khalil
Journal:  Brain Res       Date:  2005-09-22       Impact factor: 3.252

9.  All-atom model for stabilization of alpha-helical structure in peptides by hydrocarbon staples.

Authors:  Peter S Kutchukian; Jae Shick Yang; Gregory L Verdine; Eugene I Shakhnovich
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

10.  Mammalian cell penetration, siRNA transfection, and DNA transfection by supercharged proteins.

Authors:  Brian R McNaughton; James J Cronican; David B Thompson; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-23       Impact factor: 11.205

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  59 in total

1.  Highly Constrained Bicyclic Scaffolds for the Discovery of Protease-Stable Peptides via mRNA Display.

Authors:  David E Hacker; Jan Hoinka; Emil S Iqbal; Teresa M Przytycka; Matthew C T Hartman
Journal:  ACS Chem Biol       Date:  2017-02-01       Impact factor: 5.100

2.  Potential C-terminal-domain inhibitors of heat shock protein 90 derived from a C-terminal peptide helix.

Authors:  Jason Gavenonis; Nicholas E Jonas; Joshua A Kritzer
Journal:  Bioorg Med Chem       Date:  2014-06-14       Impact factor: 3.641

3.  EPSA: A Novel Supercritical Fluid Chromatography Technique Enabling the Design of Permeable Cyclic Peptides.

Authors:  Gilles H Goetz; Laurence Philippe; Michael J Shapiro
Journal:  ACS Med Chem Lett       Date:  2014-08-04       Impact factor: 4.345

Review 4.  Getting across the cell membrane: an overview for small molecules, peptides, and proteins.

Authors:  Nicole J Yang; Marlon J Hinner
Journal:  Methods Mol Biol       Date:  2015

Review 5.  Biosynthesis and Chemical Applications of Thioamides.

Authors:  Nilkamal Mahanta; D Miklos Szantai-Kis; E James Petersson; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-01-30       Impact factor: 5.100

6.  Stapled peptides: How to be quick on the uptake.

Authors:  Joshua A Kritzer
Journal:  Nat Chem Biol       Date:  2016-09-20       Impact factor: 15.040

7.  Preface.

Authors:  V L Pecoraro
Journal:  Methods Enzymol       Date:  2016       Impact factor: 1.600

8.  Conformational Restriction of Peptides Using Dithiol Bis-Alkylation.

Authors:  L Peraro; T R Siegert; J A Kritzer
Journal:  Methods Enzymol       Date:  2016-06-24       Impact factor: 1.600

9.  Biosynthesis: Methylating mushrooms.

Authors:  Albert A Bowers
Journal:  Nat Chem Biol       Date:  2017-07-18       Impact factor: 15.040

Review 10.  Peptidomimetic therapeutics: scientific approaches and opportunities.

Authors:  Nir Qvit; Samuel J S Rubin; Travis J Urban; Daria Mochly-Rosen; Eric R Gross
Journal:  Drug Discov Today       Date:  2016-11-14       Impact factor: 7.851

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