Literature DB >> 23169461

The discovery of new cyanobactins from Cyanothece PCC 7425 defines a new signature for processing of patellamides.

Wael E Houssen1, Jesko Koehnke, David Zollman, Jeremie Vendome, Andrea Raab, Margaret C M Smith, James H Naismith, Marcel Jaspars.   

Abstract

Cyanobactins, including patellamides, are a group of cyanobacterial post-translationally modified ribosomal cyclic peptides. The final product should in theory be predictable from the sequence of the precursor peptide and the associated tailoring enzymes. Understanding the mechanism and recognition requirements of these enzymes will allow their rational engineering. We have identified three new cyanobactins from a Cyanothece PCC 7425 culture subjected to a heat shock. One of these compounds revealed a novel signature signal for ThcA, the subtilisin-like serine protease that is homologous to the patellamide protease PatA. The crystal structure of the latter and modelling studies allow rationalisation of the recognition determinants for both enzymes, consistent with the ribosomal biosynthetic origin of the new compounds.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 23169461     DOI: 10.1002/cbic.201200661

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  19 in total

1.  Directing Biosynthesis: Practical Supply of Natural and Unnatural Cyanobactins.

Authors:  D Sardar; M D Tianero; E W Schmidt
Journal:  Methods Enzymol       Date:  2016-03-16       Impact factor: 1.600

2.  Modularity of RiPP Enzymes Enables Designed Synthesis of Decorated Peptides.

Authors:  Debosmita Sardar; Zhenjian Lin; Eric W Schmidt
Journal:  Chem Biol       Date:  2015-07-09

3.  Structure and protective efficacy of the Staphylococcus aureus autocleaving protease EpiP.

Authors:  Misty L Kuhn; Prachi Prachi; George Minasov; Ludmilla Shuvalova; Jiapeng Ruan; Ievgeniia Dubrovska; James Winsor; Monica Giraldi; Massimiliano Biagini; Sabrina Liberatori; Silvana Savino; Fabio Bagnoli; Wayne F Anderson; Guido Grandi
Journal:  FASEB J       Date:  2014-01-13       Impact factor: 5.191

Review 4.  The Biochemistry and Structural Biology of Cyanobactin Pathways: Enabling Combinatorial Biosynthesis.

Authors:  Wenjia Gu; Shi-Hui Dong; Snigdha Sarkar; Satish K Nair; Eric W Schmidt
Journal:  Methods Enzymol       Date:  2018-05-04       Impact factor: 1.600

Review 5.  YcaO-Dependent Posttranslational Amide Activation: Biosynthesis, Structure, and Function.

Authors:  Brandon J Burkhart; Christopher J Schwalen; Greg Mann; James H Naismith; Douglas A Mitchell
Journal:  Chem Rev       Date:  2017-03-03       Impact factor: 60.622

6.  Structure of the cyanobactin oxidase ThcOx from Cyanothece sp. PCC 7425, the first structure to be solved at Diamond Light Source beamline I23 by means of S-SAD.

Authors:  Andrew F Bent; Greg Mann; Wael E Houssen; Vitaliy Mykhaylyk; Ramona Duman; Louise Thomas; Marcel Jaspars; Armin Wagner; James H Naismith
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-10-28       Impact factor: 7.652

Review 7.  The structural biology of patellamide biosynthesis.

Authors:  Jesko Koehnke; Andrew F Bent; Wael E Houssen; Greg Mann; Marcel Jaspars; James H Naismith
Journal:  Curr Opin Struct Biol       Date:  2014-11-25       Impact factor: 6.809

Review 8.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

9.  Assessing the combinatorial potential of the RiPP cyanobactin tru pathway.

Authors:  Duane E Ruffner; Eric W Schmidt; John R Heemstra
Journal:  ACS Synth Biol       Date:  2014-09-02       Impact factor: 5.110

10.  Structure of PatF from Prochloron didemni.

Authors:  Andrew F Bent; Jesko Koehnke; Wael E Houssen; Margaret C M Smith; Marcel Jaspars; James H Naismith
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-23
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