Literature DB >> 23149459

Polyploidy and its effect on evolutionary success: old questions revisited with new tools.

A Madlung1.   

Abstract

Polyploidy, the condition of possessing more than two complete genomes in a cell, has intrigued biologists for almost a century. Polyploidy is found in many plants and some animal species and today we know that polyploidy has had a role in the evolution of all angiosperms. Despite its widespread occurrence, the direct effect of polyploidy on evolutionary success of a species is still largely unknown. Over the years many attractive hypotheses have been proposed in an attempt to assign functionality to the increased content of a duplicated genome. Among these hypotheses are the proposal that genome doubling confers distinct advantages to a polyploid and that these advantages allow polyploids to thrive in environments that pose challenges to the polyploid's diploid progenitors. This article revisits these long-standing questions and explores how the integration of recent genomic developments with ecological, physiological and evolutionary perspectives has contributed to addressing unresolved problems about the role of polyploidy. Although unsatisfactory, the current conclusion has to be that despite significant progress, there still isn't enough information to unequivocally answer many unresolved questions about cause and effect of polyploidy on evolutionary success of a species. There is, however, reason to believe that the increasingly integrative approaches discussed here should allow us in the future to make more direct connections between the effects of polyploidy on the genome and the responses this condition elicits from the organism living in its natural environment.

Entities:  

Mesh:

Year:  2012        PMID: 23149459      PMCID: PMC3554449          DOI: 10.1038/hdy.2012.79

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  58 in total

1.  Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus.

Authors:  Zhiyong Xiong; Robert T Gaeta; J Chris Pires
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-21       Impact factor: 11.205

2.  Relationship between Endopolyploidy and Cell Size in Epidermal Tissue of Arabidopsis.

Authors:  J. E. Melaragno; B. Mehrotra; A. W. Coleman
Journal:  Plant Cell       Date:  1993-11       Impact factor: 11.277

3.  Allopolyploidization lays the foundation for evolution of distinct populations: evidence from analysis of synthetic Arabidopsis allohexaploids.

Authors:  Starr C Matsushita; Anand P Tyagi; Gerad M Thornton; J Chris Pires; Andreas Madlung
Journal:  Genetics       Date:  2012-03-16       Impact factor: 4.562

Review 4.  The advantages and disadvantages of being polyploid.

Authors:  Luca Comai
Journal:  Nat Rev Genet       Date:  2005-11       Impact factor: 53.242

5.  Types of polyploids; their classification and significance.

Authors:  G L STEBBINS
Journal:  Adv Genet       Date:  1947       Impact factor: 1.944

6.  Phenotypic and transcriptomic changes associated with potato autopolyploidization.

Authors:  Robert M Stupar; Pudota B Bhaskar; Brian S Yandell; Willem A Rensink; Amy L Hart; Shu Ouyang; Richard E Veilleux; James S Busse; Robert J Erhardt; C Robin Buell; Jiming Jiang
Journal:  Genetics       Date:  2007-06-11       Impact factor: 4.562

7.  Genomewide nonadditive gene regulation in Arabidopsis allotetraploids.

Authors:  Jianlin Wang; Lu Tian; Hyeon-Se Lee; Ning E Wei; Hongmei Jiang; Brian Watson; Andreas Madlung; Thomas C Osborn; R W Doerge; Luca Comai; Z Jeffrey Chen
Journal:  Genetics       Date:  2005-09-19       Impact factor: 4.562

8.  Protein-coding genes are epigenetically regulated in Arabidopsis polyploids.

Authors:  H S Lee; Z J Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-22       Impact factor: 11.205

Review 9.  Molecular mechanisms of polyploidy and hybrid vigor.

Authors:  Z Jeffrey Chen
Journal:  Trends Plant Sci       Date:  2010-01-18       Impact factor: 18.313

10.  Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium).

Authors:  Bhupendra Chaudhary; Lex Flagel; Robert M Stupar; Joshua A Udall; Neetu Verma; Nathan M Springer; Jonathan F Wendel
Journal:  Genetics       Date:  2009-04-10       Impact factor: 4.562

View more
  108 in total

Review 1.  Evolutionary biology through the lens of budding yeast comparative genomics.

Authors:  Souhir Marsit; Jean-Baptiste Leducq; Éléonore Durand; Axelle Marchant; Marie Filteau; Christian R Landry
Journal:  Nat Rev Genet       Date:  2017-07-17       Impact factor: 53.242

2.  A Robust Methodology for Assessing Differential Homeolog Contributions to the Transcriptomes of Allopolyploids.

Authors:  J Lucas Boatwright; Lauren M McIntyre; Alison M Morse; Sixue Chen; Mi-Jeong Yoo; Jin Koh; Pamela S Soltis; Douglas E Soltis; W Brad Barbazuk
Journal:  Genetics       Date:  2018-09-13       Impact factor: 4.562

Review 3.  The evolutionary significance of polyploidy.

Authors:  Yves Van de Peer; Eshchar Mizrachi; Kathleen Marchal
Journal:  Nat Rev Genet       Date:  2017-05-15       Impact factor: 53.242

Review 4.  Hybridization in Plants: Old Ideas, New Techniques.

Authors:  Benjamin E Goulet; Federico Roda; Robin Hopkins
Journal:  Plant Physiol       Date:  2016-11-28       Impact factor: 8.340

5.  Comparison of leaf transcriptomes of cassava "Xinxuan 048" diploid and autotetraploid plants.

Authors:  Ling Yin; Junjie Qu; Huiwen Zhou; Xiaohong Shang; Hui Fang; Jiang Lu; Huabing Yan
Journal:  Genes Genomics       Date:  2018-05-15       Impact factor: 1.839

Review 6.  Polyploidy in the Arabidopsis genus.

Authors:  Kirsten Bomblies; Andreas Madlung
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

7.  Horizontal genome transfer as an asexual path to the formation of new species.

Authors:  Ignacia Fuentes; Sandra Stegemann; Hieronim Golczyk; Daniel Karcher; Ralph Bock
Journal:  Nature       Date:  2014-06-08       Impact factor: 49.962

8.  Extensive and biased intergenomic nonreciprocal DNA exchanges shaped a nascent polyploid genome, Gossypium (cotton).

Authors:  Hui Guo; Xiyin Wang; Heidrun Gundlach; Klaus F X Mayer; Daniel G Peterson; Brian E Scheffler; Peng W Chee; Andrew H Paterson
Journal:  Genetics       Date:  2014-06-06       Impact factor: 4.562

9.  Widespread ancient whole-genome duplications in Malpighiales coincide with Eocene global climatic upheaval.

Authors:  Liming Cai; Zhenxiang Xi; André M Amorim; M Sugumaran; Joshua S Rest; Liang Liu; Charles C Davis
Journal:  New Phytol       Date:  2018-07-21       Impact factor: 10.151

10.  Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation.

Authors:  Huakun Zhang; Yao Bian; Xiaowan Gou; Yuzhu Dong; Sachin Rustgi; Bangjiao Zhang; Chunming Xu; Ning Li; Bao Qi; Fangpu Han; Diter von Wettstein; Bao Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.