Literature DB >> 23143826

A docking-based receptor library of antibiotics and its novel application in predicting chronic mixture toxicity for environmental risk assessment.

Xiaoming Zou1, Xianghong Zhou, Zhifen Lin, Ziqing Deng, Daqiang Yin.   

Abstract

As organisms are typically exposed to chemical mixtures over long periods of time, chronic mixture toxicity is the best way to perform an environmental risk assessment (ERA). However, it is difficult to obtain the chronic mixture toxicity data due to the high expense and the complexity of the data acquisition method. Therefore, an approach was proposed in this study to predict chronic mixture toxicity. The acute (15 min exposure) and chronic (24 h exposure) toxicity of eight antibiotics and trimethoprim to Vibrio fischeri were determined in both single and binary mixtures. The results indicated that the risk quotients (RQs) of antibiotics should be based on the chronic mixture toxicity. To predict the chronic mixture toxicity, a docking-based receptor library of antibiotics and the receptor-library-based quantitative structure-activity relationship (QSAR) model were developed. Application of the developed QSAR model to the ERA of antibiotic mixtures demonstrated that there was a close affinity between RQs based on the observed chronic toxicity and the corresponding RQs based on the predicted data. The average coefficients of variations were 46.26 and 34.93 % and the determination coefficients (R (2)) were 0.999 and 0.998 for the low concentration group and the high concentration group, respectively. This result convinced us that the receptor library would be a promising tool for predicting the chronic mixture toxicity of antibiotics and that it can be further applied in ERA.

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Year:  2012        PMID: 23143826     DOI: 10.1007/s10661-012-2885-5

Source DB:  PubMed          Journal:  Environ Monit Assess        ISSN: 0167-6369            Impact factor:   2.513


  66 in total

Review 1.  Significance of antibiotics in the environment.

Authors:  K Kümmerer
Journal:  J Antimicrob Chemother       Date:  2003-06-12       Impact factor: 5.790

2.  THE MODE OF ACTION OF SULFONAMIDES.

Authors:  R J Henry
Journal:  Bacteriol Rev       Date:  1943-12

3.  Aquatic toxicity of acetaminophen, carbamazepine, cimetidine, diltiazem and six major sulfonamides, and their potential ecological risks in Korea.

Authors:  Younghee Kim; Kyungho Choi; Jinyong Jung; Sujung Park; Pan-Gyi Kim; Jeongim Park
Journal:  Environ Int       Date:  2007-01-16       Impact factor: 9.621

4.  The joint effects of sulfonamides and their potentiator on Photobacterium phosphoreum: differences between the acute and chronic mixture toxicity mechanisms.

Authors:  Xiaoming Zou; Zhifen Lin; Ziqing Deng; Daqiang Yin; Yalei Zhang
Journal:  Chemosphere       Date:  2011-09-23       Impact factor: 7.086

5.  Crystal structure of the anti-bacterial sulfonamide drug target dihydropteroate synthase.

Authors:  A Achari; D O Somers; J N Champness; P K Bryant; J Rosemond; D K Stammers
Journal:  Nat Struct Biol       Date:  1997-06

6.  Trimethoprim, a sulphonamide potentiator.

Authors:  S R Bushby; G H Hitchings
Journal:  Br J Pharmacol Chemother       Date:  1968-05

7.  Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.

Authors:  Irina Artsimovitch; Marina N Vassylyeva; Dmitri Svetlov; Vladimir Svetlov; Anna Perederina; Noriyuki Igarashi; Naohiro Matsugaki; Soichi Wakatsuki; Tahir H Tahirov; Dmitry G Vassylyev
Journal:  Cell       Date:  2005-08-12       Impact factor: 41.582

8.  Increased hydrophobic interactions of iclaprim with Staphylococcus aureus dihydrofolate reductase are responsible for the increase in affinity and antibacterial activity.

Authors:  Christian Oefner; Monica Bandera; Andreas Haldimann; Heike Laue; Henk Schulz; Seema Mukhija; Sandro Parisi; Laurent Weiss; Sergio Lociuro; Glenn E Dale
Journal:  J Antimicrob Chemother       Date:  2009-02-11       Impact factor: 5.790

9.  Mechanism of D-cycloserine action: alanine racemase from Escherichia coli W.

Authors:  M P Lambert; F C Neuhaus
Journal:  J Bacteriol       Date:  1972-06       Impact factor: 3.490

Review 10.  DNA gyrase: structure and function.

Authors:  R J Reece; A Maxwell
Journal:  Crit Rev Biochem Mol Biol       Date:  1991       Impact factor: 8.250

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  2 in total

1.  Evaluation of time-dependent toxicity and combined effects for a series of mono-halogenated acetonitrile-containing binary mixtures.

Authors:  Douglas A Dawson; Daphne Guinn; Gerald Pöch
Journal:  Toxicol Rep       Date:  2016-07-25

Review 2.  An Overview of Literature Topics Related to Current Concepts, Methods, Tools, and Applications for Cumulative Risk Assessment (2007-2016).

Authors:  Mary A Fox; L Elizabeth Brewer; Lawrence Martin
Journal:  Int J Environ Res Public Health       Date:  2017-04-07       Impact factor: 3.390

  2 in total

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