Literature DB >> 19211577

Increased hydrophobic interactions of iclaprim with Staphylococcus aureus dihydrofolate reductase are responsible for the increase in affinity and antibacterial activity.

Christian Oefner1, Monica Bandera, Andreas Haldimann, Heike Laue, Henk Schulz, Seema Mukhija, Sandro Parisi, Laurent Weiss, Sergio Lociuro, Glenn E Dale.   

Abstract

OBJECTIVES: Iclaprim is a novel 2,4-diaminopyrimidine that exhibits potent, rapid bactericidal activity against major Gram-positive pathogens, including methicillin-susceptible Staphylococcus aureus and methicillin-resistant S. aureus, and is currently in clinical development for the treatment of complicated skin and skin structure infections. An understanding of the known mechanism of resistance to trimethoprim led to the design of this new inhibitor, with improved affinity towards dihydrofolate reductase (DHFR) from S. aureus and clinically useful activity against S. aureus including isolates resistant to trimethoprim. The objective of this study was to characterize the mode of action of iclaprim and its inhibitory properties against DHFR.
METHODS: The mode of action of iclaprim was assessed by enzymatic analysis, direct binding studies, macromolecular synthesis profiles, synergy and antagonism studies to define its role as an inhibitor of DHFR. The binding properties of iclaprim to DHFR were compared with those of trimethoprim by X-ray crystallography.
RESULTS: The enzymatic properties, direct binding and X-ray crystallographic studies delineated the mode of interaction with DHFR and the reason for the increased affinity of iclaprim towards the enzyme. The effect of iclaprim on bacterial physiology suggests that iclaprim behaves as a classical antibacterial DHFR inhibitor, as previously documented for trimethoprim.
CONCLUSIONS: Iclaprim binds and inhibits bacterial DHFR in a similar manner to trimethoprim. However, the increased hydrophobic interactions between iclaprim and DHFR account for increased affinity and, unlike trimethoprim, enable iclaprim to inhibit even the resistant enzyme with nanomolar affinity, thus overcoming the mechanism of trimethoprim resistance. The increased antibacterial activity and lower propensity for resistance make iclaprim a clinically promising and useful inhibitor.

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Year:  2009        PMID: 19211577     DOI: 10.1093/jac/dkp024

Source DB:  PubMed          Journal:  J Antimicrob Chemother        ISSN: 0305-7453            Impact factor:   5.790


  30 in total

1.  Efficacy of iclaprim against wild-type and thymidine kinase-deficient methicillin-resistant Staphylococcus aureus isolates in an in vitro fibrin clot model.

Authors:  José M Entenza; Andreas Haldimann; Marlyse Giddey; Sergio Lociuro; Stephen Hawser; Philippe Moreillon
Journal:  Antimicrob Agents Chemother       Date:  2009-06-29       Impact factor: 5.191

2.  Protein design algorithms predict viable resistance to an experimental antifolate.

Authors:  Stephanie M Reeve; Pablo Gainza; Kathleen M Frey; Ivelin Georgiev; Bruce R Donald; Amy C Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-31       Impact factor: 11.205

3.  A docking-based receptor library of antibiotics and its novel application in predicting chronic mixture toxicity for environmental risk assessment.

Authors:  Xiaoming Zou; Xianghong Zhou; Zhifen Lin; Ziqing Deng; Daqiang Yin
Journal:  Environ Monit Assess       Date:  2012-11-11       Impact factor: 2.513

4.  Structure-activity relationship for enantiomers of potent inhibitors of B. anthracis dihydrofolate reductase.

Authors:  Christina R Bourne; Nancy Wakeham; Baskar Nammalwar; Vladimir Tseitin; Philip C Bourne; Esther W Barrow; Shankari Mylvaganam; Kal Ramnarayan; Richard A Bunce; K Darrell Berlin; William W Barrow
Journal:  Biochim Biophys Acta       Date:  2012-09-20

5.  The effects of iclaprim on exotoxin production in methicillin-resistant and vancomycin-intermediate Staphylococcus aureus.

Authors:  Amy E Bryant; Sumiko Gomi; Eva Katahira; David B Huang; Dennis L Stevens
Journal:  J Med Microbiol       Date:  2019-01-24       Impact factor: 2.472

6.  Toward Broad Spectrum Dihydrofolate Reductase Inhibitors Targeting Trimethoprim Resistant Enzymes Identified in Clinical Isolates of Methicillin Resistant Staphylococcus aureus.

Authors:  Stephanie M Reeve; Debjani Si; Jolanta Krucinska; Yongzhao Yan; Kishore Viswanathan; Siyu Wang; Graham T Holt; Marcel S Frenkel; Adegoke A Ojewole; Alexavier Estrada; Sherry S Agabiti; Jeremy B Alverson; Nathan D Gibson; Nigel D Priestley; Andrew J Wiemer; Bruce R Donald; Dennis L Wright
Journal:  ACS Infect Dis       Date:  2019-10-15       Impact factor: 5.084

Review 7.  Antifolate agents: a patent review (2006 - 2010).

Authors:  Dennis L Wright; Amy C Anderson
Journal:  Expert Opin Ther Pat       Date:  2011-05-27       Impact factor: 6.674

8.  Kinetic and structural characterization of dihydrofolate reductase from Streptococcus pneumoniae.

Authors:  Jeeyeon Lee; Neela H Yennawar; Jongsik Gam; Stephen J Benkovic
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

Review 9.  Newer antibacterial drugs for a new century.

Authors:  Gina Devasahayam; William M Scheld; Paul S Hoffman
Journal:  Expert Opin Investig Drugs       Date:  2010-02       Impact factor: 6.206

10.  Potency and bactericidal activity of iclaprim against recent clinical gram-positive isolates.

Authors:  Helio S Sader; Thomas R Fritsche; Ronald N Jones
Journal:  Antimicrob Agents Chemother       Date:  2009-03-16       Impact factor: 5.191

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