Literature DB >> 23139335

Optical control of protein activity by fluorescent protein domains.

Xin X Zhou1, Hokyung K Chung, Amy J Lam, Michael Z Lin.   

Abstract

Fluorescent proteins (FPs) are widely used as optical sensors, whereas other light-absorbing domains have been used for optical control of protein localization or activity. Here, we describe light-dependent dissociation and association in a mutant of the photochromic FP Dronpa, and we used it to control protein activities with light. We created a fluorescent light-inducible protein design in which Dronpa domains are fused to both termini of an enzyme domain. In the dark, the Dronpa domains associate and cage the protein, but light induces Dronpa dissociation and activates the protein. This method enabled optical control over guanine nucleotide exchange factor and protease domains without extensive screening. Our findings extend the applications of FPs from exclusively sensing functions to also encompass optogenetic control.

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Year:  2012        PMID: 23139335      PMCID: PMC3702057          DOI: 10.1126/science.1226854

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  31 in total

1.  Structural basis for the selective activation of Rho GTPases by Dbl exchange factors.

Authors:  Jason T Snyder; David K Worthylake; Kent L Rossman; Laurie Betts; Wendy M Pruitt; David P Siderovski; Channing J Der; John Sondek
Journal:  Nat Struct Biol       Date:  2002-06

2.  A light-switchable gene promoter system.

Authors:  Sae Shimizu-Sato; Enamul Huq; James M Tepperman; Peter H Quail
Journal:  Nat Biotechnol       Date:  2002-09-03       Impact factor: 54.908

Review 3.  Autoinhibitory domains: modular effectors of cellular regulation.

Authors:  Miles A Pufall; Barbara J Graves
Journal:  Annu Rev Cell Dev Biol       Date:  2002-04-02       Impact factor: 13.827

4.  Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting.

Authors:  Ryoko Ando; Hideaki Mizuno; Atsushi Miyawaki
Journal:  Science       Date:  2004-11-19       Impact factor: 47.728

5.  Rewiring cellular morphology pathways with synthetic guanine nucleotide exchange factors.

Authors:  Brian J Yeh; Robert J Rutigliano; Anrica Deb; Dafna Bar-Sagi; Wendell A Lim
Journal:  Nature       Date:  2007-05-21       Impact factor: 49.962

6.  PAR-6-PAR-3 mediates Cdc42-induced Rac activation through the Rac GEFs STEF/Tiam1.

Authors:  Takashi Nishimura; Tomoya Yamaguchi; Katsuhiro Kato; Masato Yoshizawa; Yo-ichi Nabeshima; Shigeo Ohno; Mikio Hoshino; Kozo Kaibuchi
Journal:  Nat Cell Biol       Date:  2005-02-20       Impact factor: 28.824

7.  Two kinase family dramas.

Authors:  Thomas A Leonard; James H Hurley
Journal:  Cell       Date:  2007-06-15       Impact factor: 41.582

8.  Activation of protein splicing with light in yeast.

Authors:  Amy B Tyszkiewicz; Tom W Muir
Journal:  Nat Methods       Date:  2008-02-13       Impact factor: 28.547

Review 9.  Roles of fascin in cell adhesion and motility.

Authors:  Josephine C Adams
Journal:  Curr Opin Cell Biol       Date:  2004-10       Impact factor: 8.382

10.  Improving FRET dynamic range with bright green and red fluorescent proteins.

Authors:  Amy J Lam; François St-Pierre; Yiyang Gong; Jesse D Marshall; Paula J Cranfill; Michelle A Baird; Michael R McKeown; Jörg Wiedenmann; Michael W Davidson; Mark J Schnitzer; Roger Y Tsien; Michael Z Lin
Journal:  Nat Methods       Date:  2012-09-09       Impact factor: 28.547

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  112 in total

1.  Predictive Spatiotemporal Manipulation of Signaling Perturbations Using Optogenetics.

Authors:  Leo Valon; Fred Etoc; Amanda Remorino; Florencia di Pietro; Xavier Morin; Maxime Dahan; Mathieu Coppey
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

2.  Filopodia Conduct Target Selection in Cortical Neurons Using Differences in Signal Kinetics of a Single Kinase.

Authors:  Yu-Ting Mao; Julia X Zhu; Kenji Hanamura; Giuliano Iurilli; Sandeep Robert Datta; Matthew B Dalva
Journal:  Neuron       Date:  2018-05-03       Impact factor: 17.173

3.  GFP variants with alternative β-strands and their application as light-driven protease sensors: a tale of two tails.

Authors:  Keunbong Do; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2013-07-08       Impact factor: 15.419

Review 4.  Molecular tools for acute spatiotemporal manipulation of signal transduction.

Authors:  Brian Ross; Sohum Mehta; Jin Zhang
Journal:  Curr Opin Chem Biol       Date:  2016-09-14       Impact factor: 8.822

Review 5.  Illuminating cell signalling with optogenetic tools.

Authors:  Doug Tischer; Orion D Weiner
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-16       Impact factor: 94.444

Review 6.  Subcellular optogenetics - controlling signaling and single-cell behavior.

Authors:  W K Ajith Karunarathne; Patrick R O'Neill; Narasimhan Gautam
Journal:  J Cell Sci       Date:  2014-11-28       Impact factor: 5.285

Review 7.  On the cutting edge: protease-based methods for sensing and controlling cell biology.

Authors:  H Kay Chung; Michael Z Lin
Journal:  Nat Methods       Date:  2020-07-13       Impact factor: 28.547

Review 8.  Plasticity of dendritic spines: subcompartmentalization of signaling.

Authors:  Lesley A Colgan; Ryohei Yasuda
Journal:  Annu Rev Physiol       Date:  2013-11-06       Impact factor: 19.318

Review 9.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Chem Biol       Date:  2014-05-13       Impact factor: 8.822

10.  Reversible optogenetic control of kinase activity during differentiation and embryonic development.

Authors:  Vishnu V Krishnamurthy; John S Khamo; Wenyan Mei; Aurora J Turgeon; Humza M Ashraf; Payel Mondal; Dil B Patel; Noah Risner; Ellen E Cho; Jing Yang; Kai Zhang
Journal:  Development       Date:  2016-10-03       Impact factor: 6.868

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