Literature DB >> 23138916

Predictive models and computational toxicology.

Thomas Knudsen1, Matthew Martin, Kelly Chandler, Nicole Kleinstreuer, Richard Judson, Nisha Sipes.   

Abstract

Understanding the potential health risks posed by environmental chemicals is a significant challenge elevated by the large number of diverse chemicals with generally uncharacterized exposures, mechanisms, and toxicities. The ToxCast computational toxicology research program was launched by EPA in 2007 and is part of the federal Tox21 consortium to develop a cost-effective approach for efficiently prioritizing the toxicity testing of thousands of chemicals and the application of this information to assessing human toxicology. ToxCast addresses this problem through an integrated workflow using high-throughput screening (HTS) of chemical libraries across more than 650 in vitro assays including biochemical assays, human cells and cell lines, and alternative models such as mouse embryonic stem cells and zebrafish embryo development. The initial phase of ToxCast profiled a library of 309 environmental chemicals, mostly pesticidal actives having rich in vivo data from guideline studies that include chronic/cancer bioassays in mice and rats, multigenerational reproductive studies in rats, and prenatal developmental toxicity endpoints in rats and rabbits. The first phase of ToxCast was used to build models that aim to determine how well in vivo animal effects can be predicted solely from the in vitro data. Phase I is now complete and both the in vitro data (ToxCast) and anchoring in vivo database (ToxRefDB) have been made available to the public (http://actor.epa.gov/). As Phase II of ToxCast is now underway, the purpose of this chapter is to review progress to date with ToxCast predictive modeling, using specific examples on developmental and reproductive effects in rats and rabbits with lessons learned during Phase I.

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Year:  2013        PMID: 23138916     DOI: 10.1007/978-1-62703-131-8_26

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

1.  Teratological effects of a panel of sixty water-soluble toxicants on zebrafish development.

Authors:  Shaukat Ali; Jeffrey Aalders; Michael K Richardson
Journal:  Zebrafish       Date:  2014-03-20       Impact factor: 1.985

Review 2.  Models of germ cell development and their application for toxicity studies.

Authors:  Daniel W Ferreira; Patrick Allard
Journal:  Environ Mol Mutagen       Date:  2015-03-28       Impact factor: 3.216

Review 3.  The Impact of Novel Assessment Methodologies in Toxicology on Green Chemistry and Chemical Alternatives.

Authors:  Ivan Rusyn; Nigel Greene
Journal:  Toxicol Sci       Date:  2018-02-01       Impact factor: 4.849

Review 4.  Endocrine-disrupting chemicals: economic, regulatory, and policy implications.

Authors:  Christopher D Kassotis; Laura N Vandenberg; Barbara A Demeneix; Miquel Porta; Remy Slama; Leonardo Trasande
Journal:  Lancet Diabetes Endocrinol       Date:  2020-08       Impact factor: 32.069

5.  A short-term in vivo screen using fetal testosterone production, a key event in the phthalate adverse outcome pathway, to predict disruption of sexual differentiation.

Authors:  Johnathan R Furr; Christy S Lambright; Vickie S Wilson; Paul M Foster; Leon E Gray
Journal:  Toxicol Sci       Date:  2014-05-05       Impact factor: 4.849

6.  Systems pharmacology meets predictive, preventive, personalized and participatory medicine.

Authors:  Sherry L Jenkins; Avi Ma'ayan
Journal:  Pharmacogenomics       Date:  2013-01       Impact factor: 2.533

7.  Non-monotonic dose responses in studies of endocrine disrupting chemicals: bisphenol a as a case study.

Authors:  Laura N Vandenberg
Journal:  Dose Response       Date:  2013-10-07       Impact factor: 2.658

8.  Mechanistic validation.

Authors:  Thomas Hartung; Sebastian Hoffmann; Martin Stephens
Journal:  ALTEX       Date:  2013       Impact factor: 6.043

9.  Predicting Organ Toxicity Using in Vitro Bioactivity Data and Chemical Structure.

Authors:  Jie Liu; Grace Patlewicz; Antony J Williams; Russell S Thomas; Imran Shah
Journal:  Chem Res Toxicol       Date:  2017-10-09       Impact factor: 3.739

10.  A systems biology approach to predictive developmental neurotoxicity of a larvicide used in the prevention of Zika virus transmission.

Authors:  Karine Audouze; Olivier Taboureau; Philippe Grandjean
Journal:  Toxicol Appl Pharmacol       Date:  2018-02-21       Impact factor: 4.219

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