Literature DB >> 23132550

Characterization of Afp1, an antifreeze protein from the psychrophilic yeast Glaciozyma antarctica PI12.

Noor Haza Fazlin Hashim1, Izwan Bharudin, Douglas Law Sie Nguong, Sakura Higa, Farah Diba Abu Bakar, Sheila Nathan, Amir Rabu, Hidehisa Kawahara, Rosli Md Illias, Nazalan Najimudin, Nor Muhammad Mahadi, Abdul Munir Abdul Murad.   

Abstract

The psychrophilic yeast Glaciozyma antarctica demonstrated high antifreeze activity in its culture filtrate. The culture filtrate exhibited both thermal hysteresis (TH) and ice recrystallization inhibition (RI) properties. The TH of 0.1 °C was comparable to that previously reported for bacteria and fungi. A genome sequence survey of the G. antarctica genome identified a novel antifreeze protein gene. The cDNA encoded a 177 amino acid protein with 30 % similarity to a fungal antifreeze protein from Typhula ishikariensis. The expression levels of AFP1 were quantified via real time-quantitative polymerase chain reaction (RT-qPCR), and the highest expression levels were detected within 6 h of growth at -12 °C. The cDNA of the antifreeze protein was cloned into an Escherichia coli expression system. Expression of recombinant Afp1 in E. coli resulted in the formation of inclusion bodies that were subsequently denatured by treatment with urea and allowed to refold in vitro. Activity assays of the recombinant Afp1 confirmed the antifreeze protein properties with a high TH value of 0.08 °C.

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Year:  2012        PMID: 23132550     DOI: 10.1007/s00792-012-0494-4

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  44 in total

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Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

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Journal:  Eur J Biochem       Date:  2002-01

8.  Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli.

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Journal:  Protein Sci       Date:  2005-02-02       Impact factor: 6.725

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Journal:  FEBS Lett       Date:  1999-12-10       Impact factor: 4.124

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Journal:  J Exp Biol       Date:  1996-09       Impact factor: 3.312

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  16 in total

1.  Growth suppression of ice crystal basal face in the presence of a moderate ice-binding protein does not confer hyperactivity.

Authors:  Maddalena Bayer-Giraldi; Gen Sazaki; Ken Nagashima; Sepp Kipfstuhl; Dmitry A Vorontsov; Yoshinori Furukawa
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-02       Impact factor: 11.205

2.  Thermotolerance and molecular chaperone function of an SGT1-like protein from the psychrophilic yeast, Glaciozyma antarctica.

Authors:  Nur Athirah Yusof; Noor Haza Fazlin Hashim; Travis Beddoe; Nor Muhammad Mahadi; Rosli Md Illias; Farah Diba Abu Bakar; Abdul Munir Abdul Murad
Journal:  Cell Stress Chaperones       Date:  2016-05-06       Impact factor: 3.667

3.  Draft genome sequences of bacteria isolated from the Deschampsia antarctica phyllosphere.

Authors:  Fernanda P Cid; Fumito Maruyama; Kazunori Murase; Steffen P Graether; Giovanni Larama; Leon A Bravo; Milko A Jorquera
Journal:  Extremophiles       Date:  2018-02-28       Impact factor: 2.395

Review 4.  Physiological adaptations of yeasts living in cold environments and their potential applications.

Authors:  Jennifer Alcaíno; Víctor Cifuentes; Marcelo Baeza
Journal:  World J Microbiol Biotechnol       Date:  2015-07-10       Impact factor: 3.312

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Authors:  Nur Athirah Yusof; Shazilah Kamaruddin; Farah Diba Abu Bakar; Nor Muhammad Mahadi; Abdul Munir Abdul Murad
Journal:  Cell Stress Chaperones       Date:  2019-01-16       Impact factor: 3.667

6.  Biochemical and structural characterization of a novel cold-active esterase-like protein from the psychrophilic yeast Glaciozyma antarctica.

Authors:  Noor Haza Fazlin Hashim; Nor Muhammad Mahadi; Rosli Md Illias; Shevin Rizal Feroz; Farah Diba Abu Bakar; Abdul Munir Abdul Murad
Journal:  Extremophiles       Date:  2018-03-20       Impact factor: 2.395

7.  Bacterial Community Structures in Freshwater Polar Environments of Svalbard.

Authors:  Spyridon Ntougias; Żaneta Polkowska; Sofia Nikolaki; Eva Dionyssopoulou; Panagiota Stathopoulou; Vangelis Doudoumis; Marek Ruman; Katarzyna Kozak; Jacek Namieśnik; George Tsiamis
Journal:  Microbes Environ       Date:  2016-09-30       Impact factor: 2.912

Review 8.  Marine Antifreeze Proteins: Structure, Function, and Application to Cryopreservation as a Potential Cryoprotectant.

Authors:  Hak Jun Kim; Jun Hyuck Lee; Young Baek Hur; Chang Woo Lee; Sun-Ha Park; Bon-Won Koo
Journal:  Mar Drugs       Date:  2017-01-27       Impact factor: 5.118

9.  Molecular Cloning and Optimization for High Level Expression of Cold-Adapted Serine Protease from Antarctic Yeast Glaciozyma antarctica PI12.

Authors:  Norsyuhada Alias; Mu'adz Ahmad Mazian; Abu Bakar Salleh; Mahiran Basri; Raja Noor Zaliha Raja Abd Rahman
Journal:  Enzyme Res       Date:  2014-06-30

10.  The Glaciozyma antarctica genome reveals an array of systems that provide sustained responses towards temperature variations in a persistently cold habitat.

Authors:  Mohd Firdaus-Raih; Noor Haza Fazlin Hashim; Izwan Bharudin; Mohd Faizal Abu Bakar; Kie Kyon Huang; Halimah Alias; Bernard K B Lee; Mohd Noor Mat Isa; Shuhaila Mat-Sharani; Suhaila Sulaiman; Lih Jinq Tay; Radziah Zolkefli; Yusuf Muhammad Noor; Douglas Sie Nguong Law; Siti Hamidah Abdul Rahman; Rosli Md-Illias; Farah Diba Abu Bakar; Nazalan Najimudin; Abdul Munir Abdul Murad; Nor Muhammad Mahadi
Journal:  PLoS One       Date:  2018-01-31       Impact factor: 3.240

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