Literature DB >> 23128323

Transcription reinitiation by RNA polymerase III.

Giorgio Dieci1, Maria Cristina Bosio, Beatrice Fermi, Roberto Ferrari.   

Abstract

The retention of transcription proteins at an actively transcribed gene contributes to maintenance of the active transcriptional state and increases the rate of subsequent transcription cycles relative to the initial cycle. This process, called transcription reinitiation, generates the abundant RNAs in living cells. The persistence of stable preinitiation intermediates on activated genes representing at least a subset of basal transcription components has long been recognized as a shared feature of RNA polymerase (Pol) I, II and III-dependent transcription in eukaryotes. Studies of the Pol III transcription machinery and its target genes in eukaryotic genomes over the last fifteen years, has uncovered multiple details on transcription reinitiation. In addition to the basal transcription factors that recruit the polymerase, Pol III itself can be retained on the same gene through multiple transcription cycles by a facilitated recycling pathway. The molecular bases for facilitated recycling are progressively being revealed with advances in structural and functional studies. At the same time, progress in our understanding of Pol III transcriptional regulation in response to different environmental cues points to the specific mechanism of Pol III reinitiation as a key target of signaling pathway regulation of cell growth. This article is part of a Special Issue entitled: Transcription by Odd Pols.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23128323     DOI: 10.1016/j.bbagrm.2012.10.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  22 in total

Review 1.  Investigating transcription reinitiation through in vitro approaches.

Authors:  Giorgio Dieci; Beatrice Fermi; Maria Cristina Bosio
Journal:  Transcription       Date:  2014

2.  High-resolution transcription maps reveal the widespread impact of roadblock termination in yeast.

Authors:  Tito Candelli; Drice Challal; Jean-Baptiste Briand; Jocelyne Boulay; Odil Porrua; Jessie Colin; Domenico Libri
Journal:  EMBO J       Date:  2018-01-19       Impact factor: 11.598

3.  The Maize Imprinted Gene Floury3 Encodes a PLATZ Protein Required for tRNA and 5S rRNA Transcription through Interaction with RNA Polymerase III.

Authors:  Qi Li; Jiechen Wang; Jianwei Ye; Xixi Zheng; Xiaoli Xiang; Changsheng Li; Miaomiao Fu; Qiong Wang; Zhiyong Zhang; Yongrui Wu
Journal:  Plant Cell       Date:  2017-09-05       Impact factor: 11.277

Review 4.  Artificial Intelligence, Healthcare, Clinical Genomics, and Pharmacogenomics Approaches in Precision Medicine.

Authors:  Habiba Abdelhalim; Asude Berber; Mudassir Lodi; Rihi Jain; Achuth Nair; Anirudh Pappu; Kush Patel; Vignesh Venkat; Cynthia Venkatesan; Raghu Wable; Matthew Dinatale; Allyson Fu; Vikram Iyer; Ishan Kalove; Marc Kleyman; Joseph Koutsoutis; David Menna; Mayank Paliwal; Nishi Patel; Thirth Patel; Zara Rafique; Rothela Samadi; Roshan Varadhan; Shreyas Bolla; Sreya Vadapalli; Zeeshan Ahmed
Journal:  Front Genet       Date:  2022-07-06       Impact factor: 4.772

5.  Gene-Specific Control of tRNA Expression by RNA Polymerase II.

Authors:  Alan Gerber; Keiichi Ito; Chi-Shuen Chu; Robert G Roeder
Journal:  Mol Cell       Date:  2020-04-15       Impact factor: 17.970

Review 6.  The Structures of Eukaryotic Transcription Pre-initiation Complexes and Their Functional Implications.

Authors:  Basil J Greber; Eva Nogales
Journal:  Subcell Biochem       Date:  2019

7.  Differential Phosphorylation of RNA Polymerase III and the Initiation Factor TFIIIB in Saccharomyces cerevisiae.

Authors:  Jaehoon Lee; Robyn D Moir; Ian M Willis
Journal:  PLoS One       Date:  2015-05-13       Impact factor: 3.240

8.  Genome-wide distribution of RNA-DNA hybrids identifies RNase H targets in tRNA genes, retrotransposons and mitochondria.

Authors:  Aziz El Hage; Shaun Webb; Alastair Kerr; David Tollervey
Journal:  PLoS Genet       Date:  2014-10-30       Impact factor: 5.917

9.  Sub1 and Maf1, two effectors of RNA polymerase III, are involved in the yeast quiescence cycle.

Authors:  Joël Acker; Ngoc-Thuy-Trinh Nguyen; Marie Vandamme; Arounie Tavenet; Audrey Briand-Suleau; Christine Conesa
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

10.  Characterization of new RNA polymerase III and RNA polymerase II transcriptional promoters in the Bovine Leukemia Virus genome.

Authors:  Benoit Van Driessche; Anthony Rodari; Nadège Delacourt; Sylvain Fauquenoy; Caroline Vanhulle; Arsène Burny; Olivier Rohr; Carine Van Lint
Journal:  Sci Rep       Date:  2016-08-22       Impact factor: 4.379

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