Literature DB >> 23127753

Genetic encoding of fluorescent RNA ensures a bright future for visualizing nucleic acid dynamics.

Jason Dictenberg1.   

Abstract

Recently RNA localization has been appreciated as an essential post-transcriptional mechanism to program local proteome composition and function. Although RNA has been visualized using diverse techniques, the use of the bacteriophage MS2 method to encode genetically fluorescent RNA has revolutionized the study of RNA dynamics in living cells. Here, I highlight the strength of MS2 compared to other techniques, and how further evolution of this system will enable the visualization of RNA in the context of complex live-cell dynamics. Although the generation of MS2-fluorescence resonance energy transfer (FRET) and MS2-bifluorescence complementation (BiFC) will require further development, it has the potential to increase significantly the signal-to-noise ratio, which is the major obstacle to rapid live-cell imaging of RNA.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23127753     DOI: 10.1016/j.tibtech.2012.09.004

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  11 in total

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2.  Real-time imaging of single engineered RNA transcripts in living cells using ratiometric bimolecular beacons.

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4.  A kinesin adapter directly mediates dendritic mRNA localization during neural development in mice.

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Journal:  J Biol Chem       Date:  2020-02-28       Impact factor: 5.157

5.  Imaging the directed transport of single engineered RNA transcripts in real-time using ratiometric bimolecular beacons.

Authors:  Xuemei Zhang; Allison L Zajac; Lingyan Huang; Mark A Behlke; Andrew Tsourkas
Journal:  PLoS One       Date:  2014-01-15       Impact factor: 3.240

Review 6.  Single-molecule fluorescence in situ hybridization: quantitative imaging of single RNA molecules.

Authors:  Sunjong Kwon
Journal:  BMB Rep       Date:  2013-02       Impact factor: 4.778

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Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2016-02-19       Impact factor: 5.814

Review 8.  Illuminating Messengers: An Update and Outlook on RNA Visualization in Bacteria.

Authors:  Lieke A van Gijtenbeek; Jan Kok
Journal:  Front Microbiol       Date:  2017-06-22       Impact factor: 5.640

Review 9.  Fluorescent probes for nucleic Acid visualization in fixed and live cells.

Authors:  Alexandre S Boutorine; Darya S Novopashina; Olga A Krasheninina; Karine Nozeret; Alya G Venyaminova
Journal:  Molecules       Date:  2013-12-11       Impact factor: 4.411

Review 10.  Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.

Authors:  Andrew Currin; Neil Swainston; Philip J Day; Douglas B Kell
Journal:  Chem Soc Rev       Date:  2015-03-07       Impact factor: 54.564

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