Literature DB >> 2312676

Species-specific oligodeoxynucleotide probes for the identification of periodontal bacteria.

K Dix1, S M Watanabe, S McArdle, D I Lee, C Randolph, B Moncla, D E Schwartz.   

Abstract

Oligodeoxynucleotide probes were developed for identification of the periodontal bacteria Actinobacillus actinomycetemcomitans, Bacteroides gingivalis, B. intermedius types I and II, B. forsythus, Eikenella corrodens, Fusobacterium nucleatum, Haemophilus aphrophilus, Streptococcus intermedius, and Wolinella recta. Probes were designed by sequencing the 16S rRNA for each bacterium, identifying hypervariable regions, and chemically synthesizing species-specific probes. These probes were specific when tested against a panel of nucleic acids from closely related bacteria.

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Year:  1990        PMID： 2312676      PMCID： PMC269598          DOI： 10.1128/jcm.28.2.319-323.1990

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  18 in total

1.  Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.

Authors:  D J Lane; B Pace; G J Olsen; D A Stahl; M L Sogin; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

Review 2.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

3.  Compilation of small ribosomal subunit RNA sequences.

Authors:  E Huysmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  1986       Impact factor: 16.971

4.  Ribosomal RNA phylogeny and the primary lines of evolutionary descent.

Authors:  N R Pace; G J Olsen; C R Woese
Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

5.  Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells.

Authors:  E F DeLong; G S Wickham; N R Pace
Journal:  Science       Date:  1989-03-10       Impact factor: 47.728

6.  DNA probe detection of periodontal pathogens.

Authors:  C K French; E D Savitt; S L Simon; S M Eklund; M C Chen; L C Klotz; K K Vaccaro
Journal:  Oral Microbiol Immunol       Date:  1986-11

7.  Use of a species-specific DNA hybridization probe for enumerating Bacteroides vulgatus in human feces.

Authors:  A P Kuritza; A A Salyers
Journal:  Appl Environ Microbiol       Date:  1985-10       Impact factor: 4.792

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  DNA probes for identification of clinically important Bacteroides species.

Authors:  A P Kuritza; C E Getty; P Shaughnessy; R Hesse; A A Salyers
Journal:  J Clin Microbiol       Date:  1986-02       Impact factor: 5.948

10.  Campylobacter pylori, the spiral bacterium associated with human gastritis, is not a true Campylobacter sp.

Authors:  P J Romaniuk; B Zoltowska; T J Trust; D J Lane; G J Olsen; N R Pace; D A Stahl
Journal:  J Bacteriol       Date:  1987-05       Impact factor: 3.490
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  29 in total

1.  A versatile solid support system for oligodeoxynucleotide probe-based hybridization assays.

Authors:  J Van Ness; S Kalbfleisch; C R Petrie; M W Reed; J C Tabone; N M Vermeulen
Journal:  Nucleic Acids Res       Date:  1991-06-25       Impact factor: 16.971

2.  Strain-specific colonization patterns and serum modulation of multi-species oral biofilm development.

Authors:  Basak Biyikoğlu; Austin Ricker; Patricia I Diaz
Journal:  Anaerobe       Date:  2012-07-05       Impact factor: 3.331

3.  Rapid presumptive identification of black-pigmented gram-negative anaerobic bacteria by using 4-methylumbelliferone derivatives.

Authors:  B J Moncla; P Braham; L K Rabe; S L Hillier
Journal:  J Clin Microbiol       Date:  1991-09       Impact factor: 5.948

Review 4.  Identification methods for campylobacters, helicobacters, and related organisms.

Authors:  S L On
Journal:  Clin Microbiol Rev       Date:  1996-07       Impact factor: 26.132

5.  Rapid identification of Actinobacillus actinomycetemcomitans, Haemophilus aphrophilus, and Haemophilus paraphrophilus by restriction enzyme analysis of PCR-amplified 16S rRNA genes.

Authors:  M P Riggio; A Lennon
Journal:  J Clin Microbiol       Date:  1997-06       Impact factor: 5.948

6.  Association of Bacteroides forsythus and a novel Bacteroides phylotype with periodontitis.

Authors:  Eugene J Leys; Sharon R Lyons; Melvin L Moeschberger; Robert W Rumpf; Ann L Griffen
Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

7.  Identification of Bacteroides forsythus in subgingival plaque from patients with advanced periodontitis.

Authors:  H Gersdorf; A Meissner; K Pelz; G Krekeler; U B Göbel
Journal:  J Clin Microbiol       Date:  1993-04       Impact factor: 5.948

8.  Evaluation of two commercial kits and arbitrarily primed PCR for identification and differentiation of Actinobacillus actinomycetemcomitans, Haemophilus aphrophilus, and Haemophilus paraphrophilus.

Authors:  B Doğan; S Asikainen; H Jousimies-Somer
Journal:  J Clin Microbiol       Date:  1999-03       Impact factor: 5.948

9.  Age and prevalence of Porphyromonas gingivalis in children.

Authors:  D L McClellan; A L Griffen; E J Leys
Journal:  J Clin Microbiol       Date:  1996-08       Impact factor: 5.948

10.  The use of oligodeoxynucleotide probes in chaotrope-based hybridization solutions.

Authors:  J Van Ness; L Chen
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971
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