| Literature DB >> 23125639 |
Guloy Alieva1, Jamshid Ashurov, Nasir Mukhamedov, Nusrat Parpiev.
Abstract
A new polymorph of 2-(benzotriazol-2-yl)acetic acid, C(8)H(7)N(3)O(2), crystallizes in the space group C2/c (Z = 8). The non-planar mol-ecule has a synplanar conformation of the carb-oxy group. The crystal structure features helices parallel to the b axis sustained by O-H⋯N hydrogen bonding which are similar to those in the known polymorph [Giordano & Zagari (1978 ▶). J. Chem. Soc. Perkin Trans. 2, pp. 312-315]. However, in the title structure, columns are formed by π-π stacking inter-actions between benzotriazole fragments of centrosymmetrically related adjacent mol-ecules [centroid-centroid distances = 3.593 (10) and 3.381 (10) Å] whereas π-π stacking inter-actions are not observed in the other polymorph. In the crystal of the title compound, C-H⋯O inter-actions are also observed.Entities:
Year: 2012 PMID: 23125639 PMCID: PMC3470195 DOI: 10.1107/S1600536812036768
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H7N3O2 | |
| Monoclinic, | Cu |
| Hall symbol: -C 2yc | Cell parameters from 408 reflections |
| θ = 5.2–43.7° | |
| µ = 0.89 mm−1 | |
| β = 96.703 (5)° | Block, colourless |
| 0.40 × 0.32 × 0.28 mm | |
| Oxford Diffraction Xcalibur, Ruby diffractometer | 1488 independent reflections |
| Radiation source: fine-focus sealed tube | 1235 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.2576 pixels mm-1 | θmax = 67.1°, θmin = 5.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4907 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1488 reflections | Δρmax = 0.15 e Å−3 |
| 120 parameters | Δρmin = −0.12 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0012 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.55191 (14) | 0.2934 (2) | −0.01273 (10) | 0.0573 (4) | |
| H1 | 0.5107 | 0.2146 | 0.0103 | 0.069* | |
| C2 | 0.52406 (16) | 0.3401 (2) | −0.08830 (10) | 0.0713 (6) | |
| H2 | 0.4617 | 0.2915 | −0.1175 | 0.086* | |
| C3 | 0.58612 (18) | 0.4597 (3) | −0.12416 (10) | 0.0763 (6) | |
| H3 | 0.5632 | 0.4868 | −0.1760 | 0.092* | |
| C4 | 0.67792 (18) | 0.5361 (2) | −0.08543 (9) | 0.0682 (5) | |
| H4 | 0.7186 | 0.6142 | −0.1094 | 0.082* | |
| C5 | 0.70856 (14) | 0.49131 (18) | −0.00695 (8) | 0.0511 (4) | |
| C6 | 0.64717 (12) | 0.37216 (17) | 0.02830 (8) | 0.0454 (4) | |
| C7 | 0.85382 (12) | 0.48491 (19) | 0.18123 (8) | 0.0517 (4) | |
| H7A | 0.9296 | 0.5179 | 0.1701 | 0.062* | |
| H7B | 0.8618 | 0.3840 | 0.2096 | 0.062* | |
| C8 | 0.80584 (12) | 0.61084 (19) | 0.23154 (8) | 0.0480 (4) | |
| N1 | 0.79426 (11) | 0.54651 (15) | 0.04583 (7) | 0.0542 (4) | |
| N2 | 0.78104 (10) | 0.46083 (14) | 0.10872 (7) | 0.0468 (3) | |
| N3 | 0.69527 (10) | 0.35514 (14) | 0.10293 (6) | 0.0457 (3) | |
| O1 | 0.87531 (9) | 0.63393 (16) | 0.29596 (6) | 0.0666 (4) | |
| H1A | 0.8481 | 0.7025 | 0.3227 | 0.100* | |
| O2 | 0.71669 (10) | 0.67914 (16) | 0.21507 (6) | 0.0672 (4) |
| C1 | 0.0544 (9) | 0.0607 (10) | 0.0547 (9) | 0.0124 (7) | −0.0024 (7) | −0.0122 (7) |
| C2 | 0.0694 (11) | 0.0844 (13) | 0.0551 (10) | 0.0264 (10) | −0.0136 (8) | −0.0231 (9) |
| C3 | 0.1008 (15) | 0.0870 (13) | 0.0384 (9) | 0.0391 (12) | −0.0026 (9) | −0.0039 (9) |
| C4 | 0.0975 (13) | 0.0652 (10) | 0.0433 (9) | 0.0255 (10) | 0.0145 (9) | 0.0059 (8) |
| C5 | 0.0650 (9) | 0.0475 (8) | 0.0414 (8) | 0.0153 (7) | 0.0087 (6) | −0.0012 (6) |
| C6 | 0.0507 (8) | 0.0468 (8) | 0.0383 (7) | 0.0133 (6) | 0.0031 (6) | −0.0038 (6) |
| C7 | 0.0471 (8) | 0.0582 (9) | 0.0482 (9) | 0.0004 (7) | −0.0008 (6) | −0.0039 (7) |
| C8 | 0.0475 (8) | 0.0574 (9) | 0.0386 (7) | −0.0016 (7) | 0.0026 (6) | 0.0013 (6) |
| N1 | 0.0677 (8) | 0.0487 (7) | 0.0479 (7) | 0.0021 (6) | 0.0132 (6) | 0.0007 (5) |
| N2 | 0.0512 (7) | 0.0488 (7) | 0.0403 (6) | 0.0007 (5) | 0.0046 (5) | −0.0023 (5) |
| N3 | 0.0477 (7) | 0.0483 (7) | 0.0403 (6) | 0.0032 (5) | 0.0027 (5) | −0.0008 (5) |
| O1 | 0.0524 (6) | 0.0924 (9) | 0.0518 (7) | 0.0143 (6) | −0.0069 (5) | −0.0215 (6) |
| O2 | 0.0643 (7) | 0.0858 (9) | 0.0482 (6) | 0.0216 (6) | −0.0072 (5) | −0.0114 (6) |
| C1—C2 | 1.362 (3) | C6—N3 | 1.3510 (17) |
| C1—C6 | 1.411 (2) | C7—N2 | 1.4431 (18) |
| C1—H1 | 0.9300 | C7—C8 | 1.509 (2) |
| C2—C3 | 1.415 (3) | C7—H7A | 0.9700 |
| C2—H2 | 0.9300 | C7—H7B | 0.9700 |
| C3—C4 | 1.356 (3) | C8—O2 | 1.1937 (19) |
| C3—H3 | 0.9300 | C8—O1 | 1.3126 (17) |
| C4—C5 | 1.409 (2) | N1—N2 | 1.3214 (17) |
| C4—H4 | 0.9300 | N2—N3 | 1.3296 (17) |
| C5—N1 | 1.354 (2) | O1—H1A | 0.8200 |
| C5—C6 | 1.403 (2) | ||
| C2—C1—C6 | 115.77 (18) | C5—C6—C1 | 121.70 (14) |
| C2—C1—H1 | 122.1 | N2—C7—C8 | 111.85 (12) |
| C6—C1—H1 | 122.1 | N2—C7—H7A | 109.2 |
| C1—C2—C3 | 122.69 (18) | C8—C7—H7A | 109.2 |
| C1—C2—H2 | 118.7 | N2—C7—H7B | 109.2 |
| C3—C2—H2 | 118.7 | C8—C7—H7B | 109.2 |
| C4—C3—C2 | 122.14 (17) | H7A—C7—H7B | 107.9 |
| C4—C3—H3 | 118.9 | O2—C8—O1 | 124.82 (14) |
| C2—C3—H3 | 118.9 | O2—C8—C7 | 124.56 (13) |
| C3—C4—C5 | 116.61 (18) | O1—C8—C7 | 110.62 (13) |
| C3—C4—H4 | 121.7 | N2—N1—C5 | 102.73 (13) |
| C5—C4—H4 | 121.7 | N1—N2—N3 | 117.02 (11) |
| N1—C5—C6 | 108.97 (13) | N1—N2—C7 | 121.50 (13) |
| N1—C5—C4 | 129.93 (17) | N3—N2—C7 | 121.45 (12) |
| C6—C5—C4 | 121.10 (16) | N2—N3—C6 | 103.30 (11) |
| N3—C6—C5 | 107.98 (13) | C8—O1—H1A | 109.5 |
| N3—C6—C1 | 130.32 (14) |
| H··· | ||||
| O1—H1 | 0.82 | 1.91 | 2.7273 (17) | 171 |
| C2—H2···O2ii | 0.93 | 2.54 | 3.365 (3) | 148 |
| C7—H7 | 0.97 | 2.49 | 3.387 (3) | 154 |
| C7—H7 | 0.97 | 2.39 | 3.268 (3) | 150 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.82 | 1.91 | 2.7273 (17) | 171 |
| C2—H2⋯O2ii | 0.93 | 2.54 | 3.365 (3) | 148 |
| C7—H7 | 0.97 | 2.49 | 3.387 (3) | 154 |
| C7—H7 | 0.97 | 2.39 | 3.268 (3) | 150 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .