| Literature DB >> 23125590 |
Azadeh Tadjarodi1, Keyvan Bijanzad, Behrouz Notash.
Abstract
In the title compound, [Co(CH(3)COO)(2)(C(6)H(8)N(2))(2)], the Co(II) ion is five-coordinated by two pyridine N atoms from two 2-amino-3-methyl-pyridine ligands, two O atoms from one acetate ion and one O atom from another acetate ion in a distorted trigonal-bipyramidal geometry. The pyridine rings are nearly perpendicular to each other [dihedral angle = 84.49 (16)°]. The crystal packing is stabilized by intra-molecular and inter-molecular N-H⋯O hydrogen-bonding inter-actions.Entities:
Year: 2012 PMID: 23125590 PMCID: PMC3470146 DOI: 10.1107/S1600536812038664
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C2H3O2)2(C6H8N2)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4996 reflections | |
| θ = 2.2–29.2° | |
| µ = 0.95 mm−1 | |
| α = 69.58 (3)° | |
| β = 79.94 (3)° | Plate, violet |
| γ = 72.42 (3)° | 0.27 × 0.23 × 0.13 mm |
| Stoe IPDS 2T diffractometer | 4996 independent reflections |
| Radiation source: fine-focus sealed tube | 2756 reflections with |
| Graphite monochromator | |
| rotation method scans | θmax = 29.2°, θmin = 2.2° |
| Absorption correction: numerical ( | |
| 11215 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4996 reflections | (Δ/σ)max = 0.001 |
| 242 parameters | Δρmax = 0.35 e Å−3 |
| 3 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.71818 (5) | 0.93397 (4) | 0.77010 (3) | 0.04555 (13) | |
| O1 | 0.6158 (3) | 1.0480 (2) | 0.62129 (18) | 0.0698 (6) | |
| O2 | 0.4417 (3) | 1.2043 (3) | 0.6980 (2) | 0.0879 (8) | |
| O3 | 0.9471 (3) | 1.0418 (2) | 0.70296 (17) | 0.0653 (6) | |
| O4 | 0.8186 (2) | 0.9932 (2) | 0.87698 (16) | 0.0593 (5) | |
| N1 | 0.5289 (3) | 0.8404 (3) | 0.8723 (2) | 0.0516 (6) | |
| N2 | 0.6160 (3) | 0.8098 (3) | 1.0513 (2) | 0.0569 (6) | |
| N3 | 0.8801 (3) | 0.7557 (2) | 0.73364 (18) | 0.0431 (5) | |
| N4 | 0.9101 (4) | 0.8685 (3) | 0.5353 (2) | 0.0638 (7) | |
| C1 | 0.5153 (3) | 0.7826 (3) | 0.9897 (2) | 0.0458 (6) | |
| C2 | 0.4051 (4) | 0.6933 (3) | 1.0468 (3) | 0.0570 (8) | |
| C3 | 0.3999 (5) | 0.6244 (4) | 1.1759 (3) | 0.0808 (11) | |
| H3A | 0.3216 | 0.5655 | 1.1991 | 0.121* | |
| H3B | 0.3618 | 0.6957 | 1.2141 | 0.121* | |
| H3C | 0.5130 | 0.5676 | 1.1978 | 0.121* | |
| C4 | 0.3094 (4) | 0.6719 (4) | 0.9766 (3) | 0.0737 (10) | |
| H4 | 0.2364 | 0.6131 | 1.0110 | 0.088* | |
| C5 | 0.3170 (4) | 0.7344 (4) | 0.8568 (3) | 0.0813 (11) | |
| H5 | 0.2486 | 0.7206 | 0.8108 | 0.098* | |
| C6 | 0.4280 (4) | 0.8170 (4) | 0.8083 (3) | 0.0684 (9) | |
| H6 | 0.4350 | 0.8593 | 0.7276 | 0.082* | |
| C7 | 0.9548 (3) | 0.7526 (3) | 0.6262 (2) | 0.0435 (6) | |
| C8 | 1.0746 (4) | 0.6286 (3) | 0.6109 (3) | 0.0540 (7) | |
| C9 | 1.1499 (5) | 0.6286 (4) | 0.4888 (3) | 0.0899 (12) | |
| H9A | 1.2360 | 0.5413 | 0.4930 | 0.135* | |
| H9B | 1.2013 | 0.7063 | 0.4530 | 0.135* | |
| H9C | 1.0602 | 0.6381 | 0.4430 | 0.135* | |
| C10 | 1.1139 (4) | 0.5139 (3) | 0.7075 (3) | 0.0636 (8) | |
| H10 | 1.1933 | 0.4319 | 0.6997 | 0.076* | |
| C11 | 1.0377 (4) | 0.5169 (3) | 0.8177 (3) | 0.0607 (8) | |
| H11 | 1.0649 | 0.4385 | 0.8837 | 0.073* | |
| C12 | 0.9222 (4) | 0.6381 (3) | 0.8255 (2) | 0.0521 (7) | |
| H12 | 0.8689 | 0.6400 | 0.8988 | 0.063* | |
| C13 | 0.5012 (4) | 1.1626 (3) | 0.6146 (3) | 0.0553 (7) | |
| C14 | 0.4425 (6) | 1.2476 (5) | 0.4946 (4) | 0.1086 (15) | |
| H14A | 0.3280 | 1.3066 | 0.5011 | 0.163* | |
| H14B | 0.4430 | 1.1849 | 0.4528 | 0.163* | |
| H14C | 0.5191 | 1.3057 | 0.4530 | 0.163* | |
| C15 | 0.9323 (4) | 1.0452 (3) | 0.8040 (2) | 0.0492 (7) | |
| C16 | 1.0438 (4) | 1.1079 (4) | 0.8434 (3) | 0.0724 (10) | |
| H16A | 1.1267 | 1.0337 | 0.8925 | 0.109* | |
| H16B | 0.9738 | 1.1690 | 0.8865 | 0.109* | |
| H16C | 1.1027 | 1.1615 | 0.7763 | 0.109* | |
| H2A | 0.666 (4) | 0.874 (3) | 1.016 (3) | 0.087* | |
| H4A | 0.842 (4) | 0.941 (4) | 0.545 (3) | 0.087* | |
| H2B | 0.587 (4) | 0.798 (4) | 1.1228 (17) | 0.087* | |
| H4B | 0.960 (4) | 0.877 (4) | 0.4681 (19) | 0.087* |
| Co1 | 0.0517 (2) | 0.0480 (2) | 0.0384 (2) | −0.01574 (17) | 0.00583 (15) | −0.01758 (17) |
| O1 | 0.0657 (14) | 0.0686 (15) | 0.0551 (14) | 0.0066 (12) | −0.0049 (10) | −0.0157 (12) |
| O2 | 0.1122 (19) | 0.0934 (19) | 0.0651 (16) | −0.0283 (15) | 0.0210 (13) | −0.0454 (15) |
| O3 | 0.0945 (15) | 0.0705 (15) | 0.0374 (12) | −0.0391 (12) | 0.0109 (10) | −0.0177 (10) |
| O4 | 0.0669 (13) | 0.0814 (15) | 0.0415 (11) | −0.0407 (11) | 0.0106 (9) | −0.0227 (11) |
| N1 | 0.0485 (13) | 0.0653 (16) | 0.0505 (15) | −0.0228 (12) | 0.0103 (10) | −0.0300 (13) |
| N2 | 0.0629 (16) | 0.0674 (18) | 0.0432 (15) | −0.0304 (13) | 0.0048 (12) | −0.0134 (14) |
| N3 | 0.0491 (13) | 0.0397 (13) | 0.0371 (13) | −0.0156 (10) | 0.0050 (10) | −0.0088 (11) |
| N4 | 0.090 (2) | 0.0453 (16) | 0.0374 (15) | −0.0059 (14) | 0.0174 (13) | −0.0117 (13) |
| C1 | 0.0416 (14) | 0.0437 (16) | 0.0521 (17) | −0.0121 (12) | 0.0104 (12) | −0.0209 (14) |
| C2 | 0.0567 (17) | 0.0534 (19) | 0.062 (2) | −0.0219 (14) | 0.0157 (15) | −0.0234 (16) |
| C3 | 0.088 (3) | 0.077 (3) | 0.076 (3) | −0.046 (2) | 0.013 (2) | −0.012 (2) |
| C4 | 0.073 (2) | 0.076 (2) | 0.089 (3) | −0.0447 (19) | 0.0195 (19) | −0.037 (2) |
| C5 | 0.078 (2) | 0.112 (3) | 0.086 (3) | −0.056 (2) | 0.0105 (19) | −0.052 (3) |
| C6 | 0.070 (2) | 0.096 (3) | 0.058 (2) | −0.0366 (19) | 0.0070 (16) | −0.039 (2) |
| C7 | 0.0474 (15) | 0.0409 (16) | 0.0431 (16) | −0.0148 (12) | 0.0059 (12) | −0.0161 (14) |
| C8 | 0.0600 (18) | 0.0420 (17) | 0.0564 (19) | −0.0130 (14) | 0.0082 (14) | −0.0174 (15) |
| C9 | 0.116 (3) | 0.061 (2) | 0.072 (2) | −0.004 (2) | 0.030 (2) | −0.030 (2) |
| C10 | 0.0599 (19) | 0.0438 (18) | 0.079 (2) | −0.0070 (15) | 0.0005 (17) | −0.0184 (18) |
| C11 | 0.0646 (19) | 0.0485 (19) | 0.057 (2) | −0.0119 (15) | −0.0061 (15) | −0.0034 (15) |
| C12 | 0.0559 (17) | 0.0555 (19) | 0.0431 (17) | −0.0218 (15) | 0.0030 (13) | −0.0103 (15) |
| C13 | 0.0556 (18) | 0.062 (2) | 0.0513 (18) | −0.0127 (16) | −0.0026 (14) | −0.0246 (16) |
| C14 | 0.135 (4) | 0.091 (3) | 0.082 (3) | 0.021 (3) | −0.048 (3) | −0.030 (2) |
| C15 | 0.0570 (17) | 0.0450 (17) | 0.0443 (17) | −0.0170 (14) | 0.0021 (13) | −0.0124 (13) |
| C16 | 0.073 (2) | 0.093 (3) | 0.068 (2) | −0.045 (2) | 0.0090 (17) | −0.032 (2) |
| Co1—O1 | 1.962 (2) | C4—C5 | 1.380 (5) |
| Co1—O3 | 2.352 (2) | C4—H4 | 0.9300 |
| Co1—O4 | 2.0028 (18) | C5—C6 | 1.359 (4) |
| Co1—N1 | 2.072 (2) | C5—H5 | 0.9300 |
| Co1—N3 | 2.074 (2) | C6—H6 | 0.9300 |
| O1—C13 | 1.265 (4) | C7—C8 | 1.419 (4) |
| O2—C13 | 1.215 (3) | C8—C10 | 1.360 (4) |
| O3—C15 | 1.233 (3) | C8—C9 | 1.512 (4) |
| O4—C15 | 1.277 (3) | C9—H9A | 0.9600 |
| N1—C1 | 1.349 (3) | C9—H9B | 0.9600 |
| N1—C6 | 1.353 (3) | C9—H9C | 0.9600 |
| N2—C1 | 1.354 (4) | C10—C11 | 1.389 (4) |
| N2—H2A | 0.845 (18) | C10—H10 | 0.9300 |
| N2—H2B | 0.840 (18) | C11—C12 | 1.354 (4) |
| N3—C12 | 1.345 (4) | C11—H11 | 0.9300 |
| N3—C7 | 1.355 (3) | C12—H12 | 0.9300 |
| N4—C7 | 1.331 (4) | C13—C14 | 1.501 (5) |
| N4—H4A | 0.83 (3) | C14—H14A | 0.9600 |
| N4—H4B | 0.839 (18) | C14—H14B | 0.9600 |
| C1—C2 | 1.414 (4) | C14—H14C | 0.9600 |
| C2—C4 | 1.367 (4) | C15—C16 | 1.492 (4) |
| C2—C3 | 1.489 (4) | C16—H16A | 0.9600 |
| C3—H3A | 0.9600 | C16—H16B | 0.9600 |
| C3—H3B | 0.9600 | C16—H16C | 0.9600 |
| C3—H3C | 0.9600 | ||
| O1—Co1—O4 | 129.30 (10) | N1—C6—C5 | 122.9 (3) |
| O1—Co1—N1 | 104.36 (10) | N1—C6—H6 | 118.5 |
| O4—Co1—N1 | 105.67 (8) | C5—C6—H6 | 118.5 |
| O1—Co1—N3 | 103.15 (9) | N4—C7—N3 | 118.0 (2) |
| O4—Co1—N3 | 112.27 (9) | N4—C7—C8 | 121.0 (2) |
| N1—Co1—N3 | 97.38 (9) | N3—C7—C8 | 121.0 (3) |
| O1—Co1—O3 | 88.36 (9) | C10—C8—C7 | 117.8 (3) |
| O4—Co1—O3 | 58.90 (7) | C10—C8—C9 | 123.1 (3) |
| N1—Co1—O3 | 164.49 (7) | C7—C8—C9 | 119.1 (3) |
| N3—Co1—O3 | 88.12 (8) | C8—C9—H9A | 109.5 |
| C13—O1—Co1 | 119.87 (19) | C8—C9—H9B | 109.5 |
| C15—O3—Co1 | 83.56 (16) | H9A—C9—H9B | 109.5 |
| C15—O4—Co1 | 98.54 (16) | C8—C9—H9C | 109.5 |
| C1—N1—C6 | 118.6 (2) | H9A—C9—H9C | 109.5 |
| C1—N1—Co1 | 127.67 (17) | H9B—C9—H9C | 109.5 |
| C6—N1—Co1 | 112.7 (2) | C8—C10—C11 | 121.3 (3) |
| C1—N2—H2A | 118 (2) | C8—C10—H10 | 119.4 |
| C1—N2—H2B | 118 (2) | C11—C10—H10 | 119.4 |
| H2A—N2—H2B | 116 (3) | C12—C11—C10 | 117.7 (3) |
| C12—N3—C7 | 118.3 (2) | C12—C11—H11 | 121.2 |
| C12—N3—Co1 | 116.71 (17) | C10—C11—H11 | 121.2 |
| C7—N3—Co1 | 124.82 (18) | N3—C12—C11 | 123.9 (3) |
| C7—N4—H4A | 120 (3) | N3—C12—H12 | 118.0 |
| C7—N4—H4B | 123 (3) | C11—C12—H12 | 118.0 |
| H4A—N4—H4B | 116 (4) | O2—C13—O1 | 123.5 (3) |
| N1—C1—N2 | 117.2 (2) | O2—C13—C14 | 121.0 (3) |
| N1—C1—C2 | 121.9 (2) | O1—C13—C14 | 115.5 (3) |
| N2—C1—C2 | 120.9 (3) | C13—C14—H14A | 109.5 |
| C4—C2—C1 | 116.4 (3) | C13—C14—H14B | 109.5 |
| C4—C2—C3 | 122.9 (3) | H14A—C14—H14B | 109.5 |
| C1—C2—C3 | 120.8 (3) | C13—C14—H14C | 109.5 |
| C2—C3—H3A | 109.5 | H14A—C14—H14C | 109.5 |
| C2—C3—H3B | 109.5 | H14B—C14—H14C | 109.5 |
| H3A—C3—H3B | 109.5 | O3—C15—O4 | 119.0 (2) |
| C2—C3—H3C | 109.5 | O3—C15—C16 | 121.8 (3) |
| H3A—C3—H3C | 109.5 | O4—C15—C16 | 119.2 (2) |
| H3B—C3—H3C | 109.5 | C15—C16—H16A | 109.5 |
| C2—C4—C5 | 122.5 (3) | C15—C16—H16B | 109.5 |
| C2—C4—H4 | 118.7 | H16A—C16—H16B | 109.5 |
| C5—C4—H4 | 118.7 | C15—C16—H16C | 109.5 |
| C6—C5—C4 | 117.6 (3) | H16A—C16—H16C | 109.5 |
| C6—C5—H5 | 121.2 | H16B—C16—H16C | 109.5 |
| C4—C5—H5 | 121.2 | ||
| O4—Co1—O1—C13 | −50.1 (3) | Co1—N1—C1—C2 | −164.79 (19) |
| N1—Co1—O1—C13 | 74.6 (2) | N1—C1—C2—C4 | −1.8 (4) |
| N3—Co1—O1—C13 | 175.9 (2) | N2—C1—C2—C4 | −179.6 (3) |
| O3—Co1—O1—C13 | −96.4 (2) | N1—C1—C2—C3 | 176.5 (3) |
| O1—Co1—O3—C15 | 138.61 (18) | N2—C1—C2—C3 | −1.3 (4) |
| O4—Co1—O3—C15 | −0.62 (17) | C1—C2—C4—C5 | −0.6 (5) |
| N1—Co1—O3—C15 | −6.9 (4) | C3—C2—C4—C5 | −179.0 (3) |
| N3—Co1—O3—C15 | −118.18 (18) | C2—C4—C5—C6 | 1.7 (6) |
| O1—Co1—O4—C15 | −56.9 (2) | C1—N1—C6—C5 | −1.9 (5) |
| N1—Co1—O4—C15 | 178.84 (17) | Co1—N1—C6—C5 | 167.7 (3) |
| N3—Co1—O4—C15 | 73.83 (19) | C4—C5—C6—N1 | −0.4 (5) |
| O3—Co1—O4—C15 | 0.60 (16) | C12—N3—C7—N4 | 178.7 (2) |
| O1—Co1—N1—C1 | −161.2 (2) | Co1—N3—C7—N4 | −6.2 (3) |
| O4—Co1—N1—C1 | −22.5 (2) | C12—N3—C7—C8 | −0.1 (4) |
| N3—Co1—N1—C1 | 93.1 (2) | Co1—N3—C7—C8 | 174.98 (19) |
| O3—Co1—N1—C1 | −16.9 (5) | N4—C7—C8—C10 | −179.8 (3) |
| O1—Co1—N1—C6 | 30.3 (2) | N3—C7—C8—C10 | −1.0 (4) |
| O4—Co1—N1—C6 | 169.0 (2) | N4—C7—C8—C9 | −0.9 (4) |
| N3—Co1—N1—C6 | −75.3 (2) | N3—C7—C8—C9 | 177.9 (3) |
| O3—Co1—N1—C6 | 174.6 (3) | C7—C8—C10—C11 | 0.9 (4) |
| O1—Co1—N3—C12 | −157.47 (18) | C9—C8—C10—C11 | −177.9 (3) |
| O4—Co1—N3—C12 | 59.53 (19) | C8—C10—C11—C12 | 0.2 (4) |
| N1—Co1—N3—C12 | −50.79 (19) | C7—N3—C12—C11 | 1.3 (4) |
| O3—Co1—N3—C12 | 114.65 (18) | Co1—N3—C12—C11 | −174.1 (2) |
| O1—Co1—N3—C7 | 27.4 (2) | C10—C11—C12—N3 | −1.4 (4) |
| O4—Co1—N3—C7 | −115.6 (2) | Co1—O1—C13—O2 | −4.2 (4) |
| N1—Co1—N3—C7 | 134.1 (2) | Co1—O1—C13—C14 | 175.0 (3) |
| O3—Co1—N3—C7 | −60.5 (2) | Co1—O3—C15—O4 | 0.9 (3) |
| C6—N1—C1—N2 | −179.0 (3) | Co1—O3—C15—C16 | −179.2 (3) |
| Co1—N1—C1—N2 | 13.1 (4) | Co1—O4—C15—O3 | −1.1 (3) |
| C6—N1—C1—C2 | 3.1 (4) | Co1—O4—C15—C16 | 179.0 (2) |
| H··· | ||||
| N2—H2 | 0.85 (2) | 2.17 (2) | 2.965 (3) | 157 (3) |
| N2—H2 | 0.84 (2) | 2.16 (2) | 2.978 (3) | 166 (3) |
| N4—H4 | 0.83 (3) | 2.10 (3) | 2.859 (3) | 153 (3) |
| N4—H4 | 0.84 (2) | 2.06 (2) | 2.881 (3) | 164 (3) |
Selected bond lengths (Å)
| Co1—O1 | 1.962 (2) |
| Co1—O3 | 2.352 (2) |
| Co1—O4 | 2.0028 (18) |
| Co1—N1 | 2.072 (2) |
| Co1—N3 | 2.074 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.85 (2) | 2.17 (2) | 2.965 (3) | 157 (3) |
| N2—H2 | 0.84 (2) | 2.16 (2) | 2.978 (3) | 166 (3) |
| N4—H4 | 0.83 (3) | 2.10 (3) | 2.859 (3) | 153 (3) |
| N4—H4 | 0.84 (2) | 2.06 (2) | 2.881 (3) | 164 (3) |
Symmetry codes: (i) ; (ii) .