Literature DB >> 23121492

Droplet microfluidics platform for highly sensitive and quantitative detection of malaria-causing Plasmodium parasites based on enzyme activity measurement.

Sissel Juul1, Christine J F Nielsen, Rodrigo Labouriau, Amit Roy, Cinzia Tesauro, Pia W Jensen, Charlotte Harmsen, Emil L Kristoffersen, Ya-Ling Chiu, Rikke Frøhlich, Paola Fiorani, Janet Cox-Singh, David Tordrup, Jørn Koch, Anne-Lise Bienvenu, Alessandro Desideri, Stephane Picot, Eskild Petersen, Kam W Leong, Yi-Ping Ho, Magnus Stougaard, Birgitta R Knudsen.   

Abstract

We present an attractive new system for the specific and sensitive detection of the malaria-causing Plasmodium parasites. The system relies on isothermal conversion of single DNA cleavage-ligation events catalyzed specifically by the Plasmodium enzyme topoisomerase I to micrometer-sized products detectable at the single-molecule level. Combined with a droplet microfluidics lab-on-a-chip platform, this design allowed for sensitive, specific, and quantitative detection of all human-malaria-causing Plasmodium species in single drops of unprocessed blood with a detection limit of less than one parasite/μL. Moreover, the setup allowed for detection of Plasmodium parasites in noninvasive saliva samples from infected patients. During recent years malaria transmission has declined worldwide, and with this the number of patients with low-parasite density has increased. Consequently, the need for accurate detection of even a few parasites is becoming increasingly important for the continued combat against the disease. We believe that the presented droplet microfluidics platform, which has a high potential for adaptation to point-of-care setups suitable for low-resource settings, may contribute significantly to meet this demand. Moreover, potential future adaptation of the presented setup for the detection of other microorganisms may form the basis for the development of a more generic platform for diagnosis, fresh water or food quality control, or other purposes within applied or basic science.

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Year:  2012        PMID: 23121492      PMCID: PMC3528816          DOI: 10.1021/nn3038594

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  28 in total

Review 1.  DNA topoisomerases: structure, function, and mechanism.

Authors:  J J Champoux
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

2.  Detection of single enzymatic events in rare or single cells using microfluidics.

Authors:  Sissel Juul; Yi-Ping Ho; Jørn Koch; Felicie F Andersen; Magnus Stougaard; Kam W Leong; Birgitta R Knudsen
Journal:  ACS Nano       Date:  2011-09-28       Impact factor: 15.881

Review 3.  Electrochemical DNA sensors.

Authors:  T Gregory Drummond; Michael G Hill; Jacqueline K Barton
Journal:  Nat Biotechnol       Date:  2003-10       Impact factor: 54.908

Review 4.  DNA topoisomerase I from parasitic protozoa: a potential target for chemotherapy.

Authors:  R M Reguera; C M Redondo; R Gutierrez de Prado; Y Pérez-Pertejo; R Balaña-Fouce
Journal:  Biochim Biophys Acta       Date:  2006-04-26

5.  In situ genotyping individual DNA molecules by target-primed rolling-circle amplification of padlock probes.

Authors:  Chatarina Larsson; Jørn Koch; Anders Nygren; George Janssen; Anton K Raap; Ulf Landegren; Mats Nilsson
Journal:  Nat Methods       Date:  2004-11-18       Impact factor: 28.547

6.  Real-time rolling circle amplification for protein detection.

Authors:  Litao Yang; Christine W Fung; Eun Jeong Cho; Andrew D Ellington
Journal:  Anal Chem       Date:  2007-03-23       Impact factor: 6.986

7.  Mutation detection and single-molecule counting using isothermal rolling-circle amplification.

Authors:  P M Lizardi; X Huang; Z Zhu; P Bray-Ward; D C Thomas; D C Ward
Journal:  Nat Genet       Date:  1998-07       Impact factor: 38.330

8.  Ultrasensitive detection of low-abundance surface-marker protein using isothermal rolling circle amplification in a microfluidic nanoliter platform.

Authors:  Tania Konry; Irina Smolina; Joel M Yarmush; Daniel Irimia; Martin L Yarmush
Journal:  Small       Date:  2010-12-27       Impact factor: 13.281

9.  Improved performance with saliva and urine as alternative DNA sources for malaria diagnosis by mitochondrial DNA-based PCR assays.

Authors:  C Putaporntip; P Buppan; S Jongwutiwes
Journal:  Clin Microbiol Infect       Date:  2011-05-20       Impact factor: 8.067

10.  The geometry of DNA supercoils modulates the DNA cleavage activity of human topoisomerase I.

Authors:  Amanda C Gentry; Sissel Juul; Christopher Veigaard; Birgitta R Knudsen; Neil Osheroff
Journal:  Nucleic Acids Res       Date:  2010-09-19       Impact factor: 16.971

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  22 in total

1.  NanoCluster Beacons as reporter probes in rolling circle enhanced enzyme activity detection.

Authors:  Sissel Juul; Judy M Obliosca; Cong Liu; Yen-Liang Liu; Yu-An Chen; Darren M Imphean; Birgitta R Knudsen; Yi-Ping Ho; Kam W Leong; Hsin-Chih Yeh
Journal:  Nanoscale       Date:  2015-05-14       Impact factor: 7.790

2.  A versatile platform for surface modification of microfluidic droplets.

Authors:  Mingqiang Li; Weiqian Jiang; Zaozao Chen; Smruthi Suryaprakash; Shixian Lv; Zhaohui Tang; Xuesi Chen; Kam W Leong
Journal:  Lab Chip       Date:  2017-02-14       Impact factor: 6.799

Review 3.  Molecular monitoring of chronic myeloid leukemia: present and future.

Authors:  Cecilia Ching Sze Yeung; Daniel Egan; Jerald P Radich
Journal:  Expert Rev Mol Diagn       Date:  2016-09-06       Impact factor: 5.225

Review 4.  New insight-guided approaches to detect, cure, prevent and eliminate malaria.

Authors:  Sushil Kumar; Renu Kumari; Richa Pandey
Journal:  Protoplasma       Date:  2014-10-17       Impact factor: 3.356

5.  One-step-immunoassay of procalcitonin enables rapid and accurate diagnosis of bacterial infection.

Authors:  Jae-Hwan Oh; Jung-Hyuk Kwon; Hye-Hyun Kim; Jeewon Lee
Journal:  RSC Adv       Date:  2021-06-17       Impact factor: 4.036

Review 6.  New Methodologies in the Molecular Monitoring of CML.

Authors:  Cecilia C S Yeung; Daniel Egan; Jerald Radich
Journal:  Curr Hematol Malig Rep       Date:  2016-04       Impact factor: 3.952

7.  Kinetic Control in Assembly of Plasmid DNA/Polycation Complex Nanoparticles.

Authors:  Yizong Hu; Zhiyu He; Yue Hao; Like Gong; Marion Pang; Gregory P Howard; Hye-Hyun Ahn; Mary Brummet; Kuntao Chen; Heng-Wen Liu; Xiyu Ke; Jinchang Zhu; Caleb F Anderson; Honggang Cui; Christopher G Ullman; Christine A Carrington; Martin G Pomper; Jung-Hee Seo; Rajat Mittal; Il Minn; Hai-Quan Mao
Journal:  ACS Nano       Date:  2019-09-10       Impact factor: 15.881

8.  Replacement of the human topoisomerase linker domain with the plasmodial counterpart renders the enzyme camptothecin resistant.

Authors:  Barbara Arnò; Ilda D'Annessa; Cinzia Tesauro; Laura Zuccaro; Alessio Ottaviani; Birgitta Knudsen; Paola Fiorani; Alessandro Desideri
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

9.  Rapid detection of single bacteria in unprocessed blood using Integrated Comprehensive Droplet Digital Detection.

Authors:  Dong-Ku Kang; M Monsur Ali; Kaixiang Zhang; Susan S Huang; Ellena Peterson; Michelle A Digman; Enrico Gratton; Weian Zhao
Journal:  Nat Commun       Date:  2014-11-13       Impact factor: 14.919

10.  Synthesis of fluorosurfactants for emulsion-based biological applications.

Authors:  Ya-Ling Chiu; Hon Fai Chan; Kyle K L Phua; Ying Zhang; Sissel Juul; Birgitta R Knudsen; Yi-Ping Ho; Kam W Leong
Journal:  ACS Nano       Date:  2014-03-25       Impact factor: 15.881

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