Literature DB >> 23112333

In vivo architecture and action of bacterial structural maintenance of chromosome proteins.

Anjana Badrinarayanan1, Rodrigo Reyes-Lamothe, Stephan Uphoff, Mark C Leake, David J Sherratt.   

Abstract

SMC (structural maintenance of chromosome) proteins act ubiquitously in chromosome processing. In Escherichia coli, the SMC complex MukBEF plays roles in chromosome segregation and organization. We used single-molecule millisecond multicolor fluorescence microscopy of live bacteria to reveal that a dimer of dimeric fluorescent MukBEF molecules acts as the minimal functional unit. On average, 8 to 10 of these complexes accumulated as "spots" in one to three discrete chromosome-associated regions of the cell, where they formed higher-order structures. Functional MukBEF within spots exchanged with freely diffusing complexes at a rate of one complex about every 50 seconds in reactions requiring adenosine triphosphate (ATP) hydrolysis. Thus, by functioning in pairs, MukBEF complexes may undergo multiple cycles of ATP hydrolysis without being released from DNA, analogous to the behavior of well-characterized molecular motors.

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Year:  2012        PMID: 23112333      PMCID: PMC3807729          DOI: 10.1126/science.1227126

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  41 in total

1.  Complex formation of MukB, MukE and MukF proteins involved in chromosome partitioning in Escherichia coli.

Authors:  M Yamazoe; T Onogi; Y Sunako; H Niki; K Yamanaka; T Ichimura; S Hiraga
Journal:  EMBO J       Date:  1999-11-01       Impact factor: 11.598

2.  Different localization of SeqA-bound nascent DNA clusters and MukF-MukE-MukB complex in Escherichia coli cells.

Authors:  K Ohsumi; M Yamazoe; S Hiraga
Journal:  Mol Microbiol       Date:  2001-05       Impact factor: 3.501

3.  Cooperative, ATP-dependent association of the nucleotide binding cassettes during the catalytic cycle of ATP-binding cassette transporters.

Authors:  Jonathan E Moody; Linda Millen; Derk Binns; John F Hunt; Philip J Thomas
Journal:  J Biol Chem       Date:  2002-04-18       Impact factor: 5.157

4.  Precise nanometer localization analysis for individual fluorescent probes.

Authors:  Russell E Thompson; Daniel R Larson; Watt W Webb
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

5.  Positive and negative regulation of SMC-DNA interactions by ATP and accessory proteins.

Authors:  Michiko Hirano; Tatsuya Hirano
Journal:  EMBO J       Date:  2004-06-03       Impact factor: 11.598

6.  A model for ATP hydrolysis-dependent binding of cohesin to DNA.

Authors:  Stefan Weitzer; Chris Lehane; Frank Uhlmann
Journal:  Curr Biol       Date:  2003-11-11       Impact factor: 10.834

7.  MukBEF on the march: taking over chromosome organization in bacteria?

Authors:  Stephan Gruber
Journal:  Mol Microbiol       Date:  2011-07-20       Impact factor: 3.501

8.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

9.  Single-molecule investigations of the stringent response machinery in living bacterial cells.

Authors:  Brian P English; Vasili Hauryliuk; Arash Sanamrad; Stoyan Tankov; Nynke H Dekker; Johan Elf
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-05       Impact factor: 11.205

10.  ATP hydrolysis is required for cohesin's association with chromosomes.

Authors:  Prakash Arumugam; Stephan Gruber; Koichi Tanaka; Christian H Haering; Karl Mechtler; Kim Nasmyth
Journal:  Curr Biol       Date:  2003-11-11       Impact factor: 10.834

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  98 in total

1.  Quantitative Analysis of Intracellular Fluorescent Foci in Live Bacteria.

Authors:  M Charl Moolman; Jacob W J Kerssemakers; Nynke H Dekker
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

Review 2.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

Review 3.  How to get (a)round: mechanisms controlling growth and division of coccoid bacteria.

Authors:  Mariana G Pinho; Morten Kjos; Jan-Willem Veening
Journal:  Nat Rev Microbiol       Date:  2013-09       Impact factor: 60.633

4.  Structural basis for the MukB-topoisomerase IV interaction and its functional implications in vivo.

Authors:  Seychelle M Vos; Nichole K Stewart; Martha G Oakley; James M Berger
Journal:  EMBO J       Date:  2013-10-04       Impact factor: 11.598

5.  DNA-segment-capture model for loop extrusion by structural maintenance of chromosome (SMC) protein complexes.

Authors:  John F Marko; Paolo De Los Rios; Alessandro Barducci; Stephan Gruber
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

6.  Disruption of a conserved CAP-D3 threonine alters condensin loading on mitotic chromosomes leading to chromosome hypercondensation.

Authors:  Muhammed Bakhrebah; Tao Zhang; Jeff R Mann; Paul Kalitsis; Damien F Hudson
Journal:  J Biol Chem       Date:  2015-01-20       Impact factor: 5.157

7.  Resolving Cytosolic Diffusive States in Bacteria by Single-Molecule Tracking.

Authors:  Julian Rocha; Jacqueline Corbitt; Ting Yan; Charles Richardson; Andreas Gahlmann
Journal:  Biophys J       Date:  2019-04-09       Impact factor: 4.033

8.  XerD unloads bacterial SMC complexes at the replication terminus.

Authors:  Xheni Karaboja; Zhongqing Ren; Hugo B Brandão; Payel Paul; David Z Rudner; Xindan Wang
Journal:  Mol Cell       Date:  2021-01-19       Impact factor: 17.970

9.  MukB-mediated Catenation of DNA Is ATP and MukEF Independent.

Authors:  Soon Bahng; Ryo Hayama; Kenneth J Marians
Journal:  J Biol Chem       Date:  2016-10-03       Impact factor: 5.157

Review 10.  Single molecule techniques in DNA repair: a primer.

Authors:  Craig D Hughes; Michelle Simons; Cassidy E Mackenzie; Bennett Van Houten; Neil M Kad
Journal:  DNA Repair (Amst)       Date:  2014-05-10
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