Literature DB >> 23105092

Heavy-metal resistance of a France vineyard soil bacterium, Pseudomonas mendocina strain S5.2, revealed by whole-genome sequencing.

Teik Min Chong1, Wai-Fong Yin, Samuel Mondy, Catherine Grandclément, Yves Dessaux, Kok-Gan Chan.   

Abstract

Here we present the draft genome of Pseudomonas mendocina strain S5.2, possessing tolerance to a high concentration of copper. In addition to being copper resistant, the genome of P. mendocina strain S5.2 contains a number of heavy-metal-resistant genes known to confer resistance to multiple heavy-metal ions.

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Year:  2012        PMID： 23105092      PMCID： PMC3486347          DOI： 10.1128/JB.01702-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Heavy metal resistance of biofilm and planktonic Pseudomonas aeruginosa.

Authors:  Gail M Teitzel; Matthew R Parsek
Journal:  Appl Environ Microbiol       Date:  2003-04       Impact factor: 4.792

2.  Structure and conformational dynamics of the metalloregulator MerR upon binding of Hg(II).

Authors:  Hao-Bo Guo; Alexander Johs; Jerry M Parks; Lyn Olliff; Susan M Miller; Anne O Summers; Liyuan Liang; Jeremy C Smith
Journal:  J Mol Biol       Date:  2010-03-19       Impact factor: 5.469

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 4.  A novel family of ubiquitous heavy metal ion transport proteins.

Authors:  I T Paulsen; M H Saier
Journal:  J Membr Biol       Date:  1997-03-15       Impact factor: 1.843

5.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

6.  Hg(II) sequestration and protection by the MerR metal-binding domain (MBD).

Authors:  Jie Qin; Lingyun Song; Hassan Brim; Michael J Daly; Anne O Summers
Journal:  Microbiology (Reading)       Date:  2006-03       Impact factor: 2.777

Review 7.  Metal bioremediation through growing cells.

Authors:  Anushree Malik
Journal:  Environ Int       Date:  2004-04       Impact factor: 9.621

8.  Identification of ion-selectivity determinants in heavy-metal transport P1B-type ATPases.

Authors:  J M Argüello
Journal:  J Membr Biol       Date:  2003-09-15       Impact factor: 1.843

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  9 in total
  9 in total

1.  Whole genome sequencing and comparative genomic analyses of Pseudomonas aeruginosa strain isolated from arable soil reveal novel insights into heavy metal resistance and codon biology.

Authors:  Jayanti Saha; Sourav Dey; Ayon Pal
Journal:  Curr Genet       Date:  2022-06-28       Impact factor: 2.695

2.  Differential Modulation of Endophytic Microbiome of Ginger in the Presence of Beneficial Organisms, Pathogens and Both as Identified by DGGE Analysis.

Authors:  Rohini Sabu; R Aswani; Priya Prabhakaran; B Krishnakumar; E K Radhakrishnan
Journal:  Curr Microbiol       Date:  2018-03-29       Impact factor: 2.188

3.  Antibiotic Resistant and Virulence Determinants of Staphylococcus haemolyticus C10A as Revealed by Whole Genome Sequencing.

Authors:  Kok-Gan Chan; Kim Tien Ng; Teik Min Chong; Yong Kek Pang; Adeeba Kamarulzaman; Wai-Fong Yin; Kok Keng Tee
Journal:  J Genomics       Date:  2015-06-03

4.  Draft Genome Sequence of Aeromonas caviae Strain L12, a Quorum-Sensing Strain Isolated from a Freshwater Lake in Malaysia.

Authors:  Kok-Gan Chan; Pui-San Chin; Kok Keng Tee; Chien-Yi Chang; Wai-Fong Yin; Kit-Yeng Sheng
Journal:  Genome Announc       Date:  2015-03-05

5.  Comprehensive genomic and phenotypic metal resistance profile of Pseudomonas putida strain S13.1.2 isolated from a vineyard soil.

Authors:  Teik Min Chong; Wai-Fong Yin; Jian-Woon Chen; Samuel Mondy; Catherine Grandclément; Denis Faure; Yves Dessaux; Kok-Gan Chan
Journal:  AMB Express       Date:  2016-10-12       Impact factor: 3.298

6.  Comparative genome analysis of the vineyard weed endophyte Pseudomonas viridiflava CDRTc14 showing selective herbicidal activity.

Authors:  Abdul Samad; Livio Antonielli; Angela Sessitsch; Stéphane Compant; Friederike Trognitz
Journal:  Sci Rep       Date:  2017-12-11       Impact factor: 4.379

7.  Phenotypic and genomic survey on organic acid utilization profile of Pseudomonas mendocina strain S5.2, a vineyard soil isolate.

Authors:  Teik Min Chong; Jian-Woon Chen; Wah-Seng See-Too; Choo-Yee Yu; Geik-Yong Ang; Yan Lue Lim; Wai-Fong Yin; Catherine Grandclément; Denis Faure; Yves Dessaux; Kok-Gan Chan
Journal:  AMB Express       Date:  2017-06-26       Impact factor: 3.298

8.  Whole Genome Analysis of Environmental Pseudomonas mendocina Strains: Virulence Mechanisms and Phylogeny.

Authors:  Lidia Ruiz-Roldán; María de Toro; Yolanda Sáenz
Journal:  Genes (Basel)       Date:  2021-01-19       Impact factor: 4.096

9.  New Look on Antifungal Activity of Silver Nanoparticles (AgNPs).

Authors:  Barbara Żarowska; Tomasz Koźlecki; Michał Piegza; Katarzyna Jaros-Koźlecka; Małgorzata Robak
Journal:  Pol J Microbiol       Date:  2019-12-05
  9 in total

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