Literature DB >> 23105055

Complete genome sequence of Bacillus subtilis strain QB928, a strain widely used in B. subtilis genetic studies.

Chi-Shing Yu1, Kay-Yuen Yim, Stephen Kwok-Wing Tsui, Ting-Fung Chan.   

Abstract

The complete genome sequence of Bacillus subtilis strain QB928 was constructed to facilitate studies in the evolution of the genetic code. With a widespread use of the strain in Bacillus subtilis genetics studies, its complete genome sequence would facilitate deeper understanding of Bacillus subtilis genetics.

Entities:  

Mesh：

Year:  2012        PMID： 23105055      PMCID： PMC3486399          DOI： 10.1128/JB.01533-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  An Ergatis-based prokaryotic genome annotation web server.

Authors:  Chris Hemmerich; Aaron Buechlein; Ram Podicheti; Kashi V Revanna; Qunfeng Dong
Journal:  Bioinformatics       Date:  2010-03-01       Impact factor: 6.937

2.  The Bacillus subtilis gene for the development transcription factor sigma K is generated by excision of a dispensable DNA element containing a sporulation recombinase gene.

Authors:  B Kunkel; R Losick; P Stragier
Journal:  Genes Dev       Date:  1990-04       Impact factor: 11.361

3.  Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps.

Authors:  Isheng J Tsai; Thomas D Otto; Matthew Berriman
Journal:  Genome Biol       Date:  2010-04-13       Impact factor: 13.583

4.  Complete nucleotide sequence of a skin element excised by DNA rearrangement during sporulation in Bacillus subtilis.

Authors:  K Takemaru; M Mizuno; T Sato; M Takeuchi; Y Kobayashi
Journal:  Microbiology       Date:  1995-02       Impact factor: 2.777

5.  Construction of a kit of reference strains for rapid genetic mapping in Bacillus subtilis 168.

Authors:  R A Dedonder; J A Lepesant; J Lepesant-Kejzlarová; A Billault; M Steinmetz; F Kunst
Journal:  Appl Environ Microbiol       Date:  1977-04       Impact factor: 4.792

6.  progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement.

Authors:  Aaron E Darling; Bob Mau; Nicole T Perna
Journal:  PLoS One       Date:  2010-06-25       Impact factor: 3.240

7.  Membership mutation of the genetic code: loss of fitness by tryptophan.

Authors:  J T Wong
Journal:  Proc Natl Acad Sci U S A       Date:  1983-10       Impact factor: 11.205

Review 8.  Bacillus subtilis and its relatives: molecular biological and industrial workhorses.

Authors:  C R Harwood
Journal:  Trends Biotechnol       Date:  1992-07       Impact factor: 19.536

9.  RATT: Rapid Annotation Transfer Tool.

Authors:  Thomas D Otto; Gary P Dillon; Wim S Degrave; Matthew Berriman
Journal:  Nucleic Acids Res       Date:  2011-02-08       Impact factor: 16.971

10.  From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later.

Authors:  Valérie Barbe; Stéphane Cruveiller; Frank Kunst; Patricia Lenoble; Guillaume Meurice; Agnieszka Sekowska; David Vallenet; Tingzhang Wang; Ivan Moszer; Claudine Médigue; Antoine Danchin
Journal:  Microbiology (Reading)       Date:  2009-04-21       Impact factor: 2.777
View more
  5 in total

1.  Comparative Genomic Analysis of Bacillus amyloliquefaciens and Bacillus subtilis Reveals Evolutional Traits for Adaptation to Plant-Associated Habitats.

Authors:  Nan Zhang; Dongqing Yang; Joshua R A Kendall; Rainer Borriss; Irina S Druzhinina; Christian P Kubicek; Qirong Shen; Ruifu Zhang
Journal:  Front Microbiol       Date:  2016-12-20       Impact factor: 5.640

Review 2.  Rising Strengths Hong Kong SAR in Bioinformatics.

Authors:  Chiranjib Chakraborty; C George Priya Doss; Hailong Zhu; Govindasamy Agoramoorthy
Journal:  Interdiscip Sci       Date:  2016-03-09       Impact factor: 2.233

3.  Genome Sequencing of Bacillus subtilis Strain XF-1 with High Efficiency in the Suppression of Plasmodiophora brassicae.

Authors:  Shengye Guo; Zichao Mao; Yixin Wu; Kun Hao; Pengfei He; Yueqiu He
Journal:  Genome Announc       Date:  2013-04-04

4.  Mutations enabling displacement of tryptophan by 4-fluorotryptophan as a canonical amino acid of the genetic code.

Authors:  Allen Chi-Shing Yu; Aldrin Kay-Yuen Yim; Wai-Kin Mat; Amy Hin-Yan Tong; Si Lok; Hong Xue; Stephen Kwok-Wing Tsui; J Tze-Fei Wong; Ting-Fung Chan
Journal:  Genome Biol Evol       Date:  2014-03       Impact factor: 3.416

5.  The first structure in a family of peptidase inhibitors reveals an unusual Ig-like fold.

Authors:  Daniel J Rigden; Qingping Xu; Yuanyuan Chang; Ruth Y Eberhardt; Robert D Finn; Neil D Rawlings
Journal:  F1000Res       Date:  2013-07-10
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.