Literature DB >> 23105050

Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T.

Michael Pester1, Evelyne Brambilla, Didier Alazard, Thomas Rattei, Thomas Weinmaier, James Han, Susan Lucas, Alla Lapidus, Jan-Fang Cheng, Lynne Goodwin, Sam Pitluck, Lin Peters, Galina Ovchinnikova, Hazuki Teshima, John C Detter, Cliff S Han, Roxanne Tapia, Miriam L Land, Loren Hauser, Nikos C Kyrpides, Natalia N Ivanova, Ioanna Pagani, Marcel Huntmann, Chia-Lin Wei, Karen W Davenport, Hajnalka Daligault, Patrick S G Chain, Amy Chen, Konstantinos Mavromatis, Victor Markowitz, Ernest Szeto, Natalia Mikhailova, Amrita Pati, Michael Wagner, Tanja Woyke, Bernard Ollivier, Hans-Peter Klenk, Stefan Spring, Alexander Loy.   

Abstract

Desulfosporosinus species are sulfate-reducing bacteria belonging to the Firmicutes. Their genomes will give insights into the genetic repertoire and evolution of sulfate reducers typically thriving in terrestrial environments and able to degrade toluene (Desulfosporosinus youngiae), to reduce Fe(III) (Desulfosporosinus meridiei, Desulfosporosinus orientis), and to grow under acidic conditions (Desulfosporosinus acidiphilus).

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Year:  2012        PMID： 23105050      PMCID： PMC3486391          DOI： 10.1128/JB.01392-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  22 in total

1.  Solexa Ltd.

Authors:  Simon Bennett
Journal:  Pharmacogenomics       Date:  2004-06       Impact factor: 2.533

2.  Quantification of Tinto River sediment microbial communities: importance of sulfate-reducing bacteria and their role in attenuating acid mine drainage.

Authors:  Irene Sánchez-Andrea; Katrin Knittel; Rudolf Amann; Ricardo Amils; José Luis Sanz
Journal:  Appl Environ Microbiol       Date:  2012-04-27       Impact factor: 4.792

3.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Iron transformations induced by an acid-tolerant Desulfosporosinus species.

Authors:  Doug Bertel; John Peck; Thomas J Quick; John M Senko
Journal:  Appl Environ Microbiol       Date:  2011-10-28       Impact factor: 4.792

5.  Desulfosporosinus meridiei sp. nov., a spore-forming sulfate-reducing bacterium isolated from gasolene-contaminated groundwater.

Authors:  W J Robertson; J P Bowman; P D Franzmann; B J Mee
Journal:  Int J Syst Evol Microbiol       Date:  2001-01       Impact factor: 2.747

6.  Sulfate reduction at pH 4.0 for treatment of process and wastewaters.

Authors:  Martijn F M Bijmans; Erik de Vries; Chun-Hui Yang; Cees J N Buisman; Piet N L Lens; Mark Dopson
Journal:  Biotechnol Prog       Date:  2010 Jul-Aug

7.  Structure and function of the microbial community in an in situ reactor to treat an acidic mine pit lake.

Authors:  Matthias Koschorreck; Walter Geller; Thomas Neu; Sabine Kleinsteuber; Tobias Kunze; Annegret Trosiener; Katrin Wendt-Potthoff
Journal:  FEMS Microbiol Ecol       Date:  2010-04-14       Impact factor: 4.194

8.  Genome sequence of Desulfosporosinus sp. OT, an acidophilic sulfate-reducing bacterium from copper mining waste in Norilsk, Northern Siberia.

Authors:  Helge K Abicht; Stefano Mancini; Olga V Karnachuk; Marc Solioz
Journal:  J Bacteriol       Date:  2011-11       Impact factor: 3.490

9.  Desulfosporosinus hippei sp. nov., a mesophilic sulfate-reducing bacterium isolated from permafrost.

Authors:  A Vatsurina; D Badrutdinova; P Schumann; S Spring; M Vainshtein
Journal:  Int J Syst Evol Microbiol       Date:  2008-05       Impact factor: 2.747

10.  A novel arsenate respiring isolate that can utilize aromatic substrates.

Authors:  Anbo Liu; Elizabeth Garcia-Dominguez; E D Rhine; L Y Young
Journal:  FEMS Microbiol Ecol       Date:  2004-06-01       Impact factor: 4.194
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  16 in total

1.  The impact of gamma radiation on sediment microbial processes.

Authors:  Ashley R Brown; Christopher Boothman; Simon M Pimblott; Jonathan R Lloyd
Journal:  Appl Environ Microbiol       Date:  2015-04-03       Impact factor: 4.792

2.  Predominance of Anaerobic, Spore-Forming Bacteria in Metabolically Active Microbial Communities from Ancient Siberian Permafrost.

Authors:  Renxing Liang; Maggie Lau; Tatiana Vishnivetskaya; Karen G Lloyd; Wei Wang; Jessica Wiggins; Jennifer Miller; Susan Pfiffner; Elizaveta M Rivkina; Tullis C Onstott
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

3.  Sequential biodegradation of 1,2,4-trichlorobenzene at oxic-anoxic groundwater interfaces in model laboratory columns.

Authors:  Steven J Chow; Michelle M Lorah; Amar R Wadhawan; Neal D Durant; Edward J Bouwer
Journal:  J Contam Hydrol       Date:  2020-03-25       Impact factor: 3.188

4.  A genomic signature and the identification of new sporulation genes.

Authors:  Ana B Abecasis; Mónica Serrano; Renato Alves; Leonor Quintais; José B Pereira-Leal; Adriano O Henriques
Journal:  J Bacteriol       Date:  2013-02-08       Impact factor: 3.490

5.  Draft Genome Sequence of Uncultivated Desulfosporosinus sp. Strain Tol-M, Obtained by Stable Isotope Probing Using [13C6]Toluene.

Authors:  Nidal Abu Laban; BoonFei Tan; Anh Dao; Julia Foght
Journal:  Genome Announc       Date:  2015-01-15

6.  vanI: a novel D-Ala-D-Lac vancomycin resistance gene cluster found in Desulfitobacterium hafniense.

Authors:  Thomas Kruse; Mark Levisson; Willem M de Vos; Hauke Smidt
Journal:  Microb Biotechnol       Date:  2014-07-05       Impact factor: 5.813

7.  Reconstruction of the Metabolic Potential of Acidophilic Sideroxydans Strains from the Metagenome of an Microaerophilic Enrichment Culture of Acidophilic Iron-Oxidizing Bacteria from a Pilot Plant for the Treatment of Acid Mine Drainage Reveals Metabolic Versatility and Adaptation to Life at Low pH.

Authors:  Martin Mühling; Anja Poehlein; Anna Stuhr; Matthias Voitel; Rolf Daniel; Michael Schlömann
Journal:  Front Microbiol       Date:  2016-12-22       Impact factor: 5.640

8.  Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile.

Authors:  Emily Denise Melton; Dimitry Y Sorokin; Lex Overmars; Alla L Lapidus; Manoj Pillay; Natalia Ivanova; Tijana Glavina Del Rio; Nikos C Kyrpides; Tanja Woyke; Gerard Muyzer
Journal:  Stand Genomic Sci       Date:  2017-09-21

9.  Diversity of cobalamin riboswitches in the corrinoid-producing organohalide respirer Desulfitobacterium hafniense.

Authors:  Pallavi K Choudhary; Aurélie Duret; Emmanuelle Rohrbach-Brandt; Christof Holliger; Roland K O Sigel; Julien Maillard
Journal:  J Bacteriol       Date:  2013-09-13       Impact factor: 3.490

10.  Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms.

Authors:  Bela Hausmann; Klaus-Holger Knorr; Katharina Schreck; Susannah G Tringe; Tijana Glavina Del Rio; Alexander Loy; Michael Pester
Journal:  ISME J       Date:  2016-03-25       Impact factor: 10.302
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