Literature DB >> 23103077

Computational investigations of HNO in biology.

Yong Zhang1.   

Abstract

HNO (n class="Chemical">nitroxyl) has been found to have many physiological effects in numerous biological processes. Computational investigations have been employed to help understand the structural properties of HNO complexes and HNO reactivities in some interesting biologically relevant systems. The following computational aspects were reviewed in this work: 1) structural and energetic properties of HNO isomers; 2) interactions between HNO and non-metal molecules; 3) structural and spectroscopic properties of HNO metal complexes; 4) HNO reactions with biologically important non-metal systems; 5) involvement of HNO in reactions of metal complexes and metalloproteins. Results indicate that computational investigations are very helpful to elucidate interesting experimental phenomena and provide new insights into unique structural, spectroscopic, and mechanistic properties of HNO involvement in biology.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23103077      PMCID: PMC3615895          DOI: 10.1016/j.jinorgbio.2012.09.023

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  60 in total

1.  Nitroxyl gets to the heart of the matter.

Authors:  Martin Feelisch
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

2.  Enzyme reactivation by hydrogen peroxide in heme-based tryptophan dioxygenase.

Authors:  Rong Fu; Rupal Gupta; Jiafeng Geng; Kednerlin Dornevil; Siming Wang; Yong Zhang; Michael P Hendrich; Aimin Liu
Journal:  J Biol Chem       Date:  2011-06-01       Impact factor: 5.157

3.  Theoretical study of hydrogen bonding interaction in nitroxyl (HNO) dimer: interrelationship of the two N-H...O blue-shifting hydrogen bonds.

Authors:  Ying Liu; Wenqing Liu; Haiyang Li; Jianguo Liu; Yong Yang
Journal:  J Phys Chem A       Date:  2006-10-19       Impact factor: 2.781

4.  Metal centre effects on HNO binding in porphyrins and the electronic origin: metal's electronic configuration, position in the periodic table, and oxidation state.

Authors:  Liu Yang; Weihai Fang; Yong Zhang
Journal:  Chem Commun (Camb)       Date:  2012-03-09       Impact factor: 6.222

5.  Horseradish peroxidase catalyzed nitric oxide formation from hydroxyurea.

Authors:  Jinming Huang; Erin M Sommers; Daniel B Kim-Shapiro; S Bruce King
Journal:  J Am Chem Soc       Date:  2002-04-03       Impact factor: 15.419

6.  Nitroxyl and its anion in aqueous solutions: spin states, protic equilibria, and reactivities toward oxygen and nitric oxide.

Authors:  Vladimir Shafirovich; Sergei V Lymar
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

7.  Solid-state NMR, crystallographic, and computational investigation of bisphosphonates and farnesyl diphosphate synthase-bisphosphonate complexes.

Authors:  Junhong Mao; Sujoy Mukherjee; Yong Zhang; Rong Cao; John M Sanders; Yongcheng Song; Yonghui Zhang; Gary A Meints; Yi Gui Gao; Dushyant Mukkamala; Michael P Hudock; Eric Oldfield
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

8.  Three redox states of nitrosyl: NO+, NO*, and NO-/HNO interconvert reversibly on the same pentacyanoferrate(II) platform.

Authors:  Andrea C Montenegro; Valentín T Amorebieta; Leonardo D Slep; Diego F Martín; Federico Roncaroli; Daniel H Murgida; Sara E Bari; José A Olabe
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

9.  A nitrosyl hydride complex of a heme model [Ru(ttp)(HNO)(1-MeIm)] (ttp=tetratolylporphyrinato dianion).

Authors:  Jonghyuk Lee; George B Richter-Addo
Journal:  J Inorg Biochem       Date:  2004-07       Impact factor: 4.155

10.  The effects of nitroxyl (HNO) on soluble guanylate cyclase activity: interactions at ferrous heme and cysteine thiols.

Authors:  Thomas W Miller; Melisa M Cherney; Andrea J Lee; Nestor E Francoleon; Patrick J Farmer; S Bruce King; Adrian J Hobbs; Katrina M Miranda; Judith N Burstyn; Jon M Fukuto
Journal:  J Biol Chem       Date:  2009-06-15       Impact factor: 5.157

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  7 in total

1.  HNO-Binding in Heme Proteins: Effects of Iron Oxidation State, Axial Ligand, and Protein Environment.

Authors:  Rahul L Khade; Yuwei Yang; Yelu Shi; Yong Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2016-10-31       Impact factor: 15.336

2.  Over or under: hydride attack at the metal versus the coordinated nitrosyl ligand in ferric nitrosyl porphyrins.

Authors:  E G Abucayon; R L Khade; D R Powell; M J Shaw; Y Zhang; G B Richter-Addo
Journal:  Dalton Trans       Date:  2016-11-15       Impact factor: 4.390

Review 3.  The Chemistry of HNO: Mechanisms and Reaction Kinetics.

Authors:  Radosław Michalski; Renata Smulik-Izydorczyk; Jakub Pięta; Monika Rola; Angelika Artelska; Karolina Pierzchała; Jacek Zielonka; Balaraman Kalyanaraman; Adam Bartłomiej Sikora
Journal:  Front Chem       Date:  2022-07-05       Impact factor: 5.545

4.  Photolytic mechanisms of hydroxylamine.

Authors:  Jittima Thisuwan; Phorntep Promma; Kritsana Sagarik
Journal:  RSC Adv       Date:  2020-02-26       Impact factor: 4.036

5.  Hydride Attack on a Coordinated Ferric Nitrosyl: Experimental and DFT Evidence for the Formation of a Heme Model-HNO Derivative.

Authors:  Erwin G Abucayon; Rahul L Khade; Douglas R Powell; Yong Zhang; George B Richter-Addo
Journal:  J Am Chem Soc       Date:  2015-12-23       Impact factor: 15.419

6.  Response of N2O production rate to ocean acidification in the western North Pacific.

Authors:  Florian Breider; Chisato Yoshikawa; Akiko Makabe; Sakae Toyoda; Masahide Wakita; Yohei Matsui; Shinsuke Kawagucci; Tetsuichi Fujiki; Naomi Harada; Naohiro Yoshida
Journal:  Nat Clim Chang       Date:  2019-11-11

7.  HNO/NO Conversion Mechanisms of Cu-Based HNO Probes with Implications for Cu,Zn-SOD.

Authors:  Matthew A Michael; Gianna Pizzella; Liu Yang; Yelu Shi; Tiffany Evangelou; Daniel T Burke; Yong Zhang
Journal:  J Phys Chem Lett       Date:  2014-03-07       Impact factor: 6.475

  7 in total

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