Literature DB >> 23101786

Locally learning biomedical data using diffusion frames.

M Ehler1, F Filbir, H N Mhaskar.   

Abstract

Diffusion geometry techniques are useful to classify patterns and visualize high-dimensional datasets. Building upon ideas from diffusion geometry, we outline our mathematical foundations for learning a function on high-dimension biomedical data in a local fashion from training data. Our approach is based on a localized summation kernel, and we verify the computational performance by means of exact approximation rates. After these theoretical results, we apply our scheme to learn early disease stages in standard and new biomedical datasets.

Mesh:

Year:  2012        PMID: 23101786      PMCID: PMC3493038          DOI: 10.1089/cmb.2012.0187

Source DB:  PubMed          Journal:  J Comput Biol        ISSN: 1066-5277            Impact factor:   1.479


  16 in total

1.  Nonlinear dimensionality reduction by locally linear embedding.

Authors:  S T Roweis; L K Saul
Journal:  Science       Date:  2000-12-22       Impact factor: 47.728

2.  A global geometric framework for nonlinear dimensionality reduction.

Authors:  J B Tenenbaum; V de Silva; J C Langford
Journal:  Science       Date:  2000-12-22       Impact factor: 47.728

3.  Direct curvature correction for noncontact imaging modalities applied to multispectral imaging.

Authors:  Jana M Kainerstorfer; Franck Amyot; Martin Ehler; Moinuddin Hassan; Stavros G Demos; Victor Chernomordik; Christoph K Hitzenberger; Amir H Gandjbakhche; Jason D Riley
Journal:  J Biomed Opt       Date:  2010 Jul-Aug       Impact factor: 3.170

4.  Geometric diffusions as a tool for harmonic analysis and structure definition of data: multiscale methods.

Authors:  R R Coifman; S Lafon; A B Lee; M Maggioni; B Nadler; F Warner; S W Zucker
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-17       Impact factor: 11.205

Review 5.  Nutritional supplements for age-related macular degeneration.

Authors:  Nupura Krishnadev; Annal D Meleth; Emily Y Chew
Journal:  Curr Opin Ophthalmol       Date:  2010-05       Impact factor: 3.761

6.  A model of spectral filtering to reduce photochemical damage in age-related macular degeneration.

Authors:  Sanford M Meyers; Mikhail A Ostrovsky; Robert F Bonner
Journal:  Trans Am Ophthalmol Soc       Date:  2004

7.  Summary results and recommendations from the age-related eye disease study.

Authors:  Emily Y Chew; Anne S Lindblad; Traci Clemons
Journal:  Arch Ophthalmol       Date:  2009-12

8.  Age-related macular degeneration.

Authors:  Hanna R Coleman; Chi-Chao Chan; Frederick L Ferris; Emily Y Chew
Journal:  Lancet       Date:  2008-11-22       Impact factor: 79.321

9.  Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.

Authors:  R R Coifman; S Lafon; A B Lee; M Maggioni; B Nadler; F Warner; S W Zucker
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-17       Impact factor: 12.779

10.  Quantitative principal component model for skin chromophore mapping using multi-spectral images and spatial priors.

Authors:  Jana M Kainerstorfer; Jason D Riley; Martin Ehler; Laleh Najafizadeh; Franck Amyot; Moinuddin Hassan; Randall Pursley; Stavros G Demos; Victor Chernomordik; Michael Pircher; Paul D Smith; Christoph K Hitzenberger; Amir H Gandjbakhche
Journal:  Biomed Opt Express       Date:  2011-04-01       Impact factor: 3.732

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