| Literature DB >> 23091345 |
Fengjing Liu1, Weixin Lu, Qiaohui Qian, Weigang Qi, Jifan Hu, Bo Feng.
Abstract
Toll-like receptors (TLRs) are pivotal components of the innate immune response. Activation of the innate immune system and subsequent chronic low-grade inflammation are thought to be involved in the pathogenesis of atherosclerosis and type 2 diabetes. In the study, we genotyped TLRs gene polymorphisms, including TLR2 Arg677Trp and Arg753Gln, TLR4 Asp299Gly and Thr399Ile, TLR9-1486T/C and -1237T/C. The frequencies of TT, TC and CC genotype of TLR9-1486T/C mutation were 39.6%, 45.8% and 14.6%, respectively; the frequencies of T allele and C allele were 62.5% and 37.5%. However, neither of these parameters was statistically significant among study groups. In addition, we were surprised to find that the commonly reported TLR SNPs in the Western countries, like TLR2 Arg677Trp or Arg753Gln, TLR4 Asp299Gly or Thr399Ile and TLR9-1237T/C, were not polymorphic at all in all study subjects. In conclusion, our data suggests that TLR2 Arg677Trp or Arg753Gln, TLR4 Asp299Gly or Thr399Ile and TLR9-1237T/C polymorphisms have low frequency and TLR9-1486T/C polymorphism may not be a suitable marker in predicting the susceptibility to type 2 diabetes or coronary artery disease in the Chinese Han population.Entities:
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Year: 2012 PMID: 23091345 PMCID: PMC3469311 DOI: 10.1155/2012/373945
Source DB: PubMed Journal: J Biomed Biotechnol ISSN: 1110-7243
Clinical characteristics among groups in study population.
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| Control | CAD | DM | DM + CAD |
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|---|---|---|---|---|---|
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| 43/23 | 113/60 | 20/13 | 95/65 |
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| Age, years | 60.3 ± 8.0 | 62.9 ± 9.6 | 61.6 ± 8.7 | 65.3 ± 8.7 |
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| Smoker, | 20 (30.0%) | 76 (43.9%) | 9 (27.3%) | 58 (36.2%) |
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| Obesity, | 11 (16.7%) | 21 (12.1%) | 6 (18.2%) | 26 (16.2%) |
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| Hypertention, | 29 (43.9%) | 107 (61.8%) | 17 (51.5%) | 120 (75.0%) |
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| Dyslipidaemia, | 26 (39.4%) | 93 (53.8%) | 18 (54.5%) | 97 (60.4%) |
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Data were means ± SD or percentages (%). *χ2 test. †One-way ANOVA.
Primers, PCR conditions, and restriction enzymes used for genotyping TLRs gene.
| SNPs | Primer sequence 5′-3′ | AT | PCR product | RE | Expected product | |
|---|---|---|---|---|---|---|
| TLR2 | Arg677Trp | F: TAT GGT CCA GGA GCT GGA GA | 60°C | 430 bp | AciI | Wt: 228 bp |
| Arg753Gln | R: TGA CAT AAA GAT CCC AAC TAG ACA A | Arg677Trp: 283 bp | ||||
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| TLR4 | Arg299Gly | F: GAT TAG CAT ACT TAG ACT ACT ACC TCC ATG | 55°C | 249 bp | NcoI | |
| R: GAT CAA CTT CTG AAA AAG CAT TCC CAC |
Wt: 249 bp | |||||
| Thr399Ile | F: GGT TGC TGT TCT CAA AGT GAT TTT GGG AGA A | 60°C | 406 bp | HinfI | ||
| R:A CCT GAA GAC TGG AGA GTG AGT TAA ATG CT |
Wt: 406 bp | |||||
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| TLR9 | T-1237C | F: ATG GGA GCA GAG ACA TAA TGG A | 62°C | 135 bp | BstNI | |
| R: CTG CTT GCA GTT GAC TGT GT |
Wt: 108 bp | |||||
| T-1486C | F: TCC CAG CAG CAA CAA TTC ATT A | 62°C | 499 bp | AflII | ||
| R: CTG CTT GCA GTT GAC TGT GT |
Wt: 327 bp | |||||
F: forward primer; R: reverse primer; AT: annealing temperature; RE: restriction enzyme.
Figure 1Electrophoretic result of TLR9 gene PCR products.100 bp DNA Ladder Marker is shown in lane M. TLR9 gene PCR products (TLR9-1237T/C = 135 bp, TLR9-1486T/C = 499 bp) are shown respectively in lanes 1–4 and lanes 5–7.
Figure 2Electrophoretic separation of TLR9 gene PCR fragments after restriction endonuclease cleavage on a 2% agarose gel. Two heterozygous carriers are shown in lane 1 and 5. A homozygous mutation sample is shown in lane 2. Three wild-type samples are shown in lanes 3, 4, and 6. 50 bp DNA Ladder Marker is shown in lane M.
Genotype distribution of TLR9-1486T/C promoter polymorphism.
| SNP | Genotypes | Total | Allele frequency | |||
|---|---|---|---|---|---|---|
| TT | TC | CC | C | T | ||
| Non-CAD | 46 | 41 | 12 | 99 | 65 (32.8%) | 133 (67.2%) |
| CAD | 135 | 147 | 51 | 333 | 249 (37.4%) | 417 (62.6%) |
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| Non-DM | 91 | 103 | 34 | 239 | 171 (37.5%) | 285 (62.5%) |
| DM | 79 | 85 | 29 | 193 | 143 (37%) | 243 (63%) |
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| Control | 23 | 37 | 6 | 66 | 49 (37.1%) | 83 (62.9%) |
| CAD | 69 | 76 | 28 | 173 | 132 (38.2%) | 214 (61.8%) |
| DM | 13 | 14 | 6 | 33 | 26 (39.4%) | 40 (60.6%) |
| DM + CAD | 66 | 71 | 23 | 160 | 117 (36.6%) | 203 (63.4) |
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Control: control group; CHD: CAD group; DM: T2DM group; DM + CAD = type 2 diabetes mellitus plus coronary artery disease group.
Comparison of TLR9-1486T/C promoter polymorphism in Asian population.
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| Genotype |
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|---|---|---|---|---|
| TT | TC | CC | ||
| Hong Kong | 335 (43.6%) | 350 (45.5%) | 84 (10.9%) | 0.256 |
| Japanese | 51 (25.8%) | 108 (54.5%) | 39 (19.7%) | 0.093 |
| This study | 23 (34.8%) | 37 (56.1%) | 6 (9.1%) | |