Literature DB >> 23087494

Dynamical quorum-sensing in oscillators coupled through an external medium.

David J Schwab1, Ania Baetica, Pankaj Mehta.   

Abstract

Many biological and physical systems exhibit population-density dependent transitions to synchronized oscillations in a process often termed "dynamical quorum sensing". Synchronization frequently arises through chemical communication via signaling molecules distributed through an external medium. We study a simple theoretical model for dynamical quorum sensing: a heterogenous population of limit-cycle oscillators diffusively coupled through a common medium. We show that this model exhibits a rich phase diagram with four qualitatively distinct physical mechanisms that can lead to a loss of coherent population-level oscillations, including a novel mechanism arising from effective time-delays introduced by the external medium. We derive a single pair of analytic equations that allow us to calculate phase boundaries as a function of population density and show that the model reproduces many of the qualitative features of recent experiments on BZ catalytic particles as well as synthetically engineered bacteria.

Entities:  

Year:  2012        PMID: 23087494      PMCID: PMC3475529          DOI: 10.1016/j.physd.2012.08.005

Source DB:  PubMed          Journal:  Physica D        ISSN: 0167-2789            Impact factor:   2.300


  10 in total

1.  Distributed delays facilitate amplitude death of coupled oscillators.

Authors:  Fatihcan M Atay
Journal:  Phys Rev Lett       Date:  2003-08-27       Impact factor: 9.161

2.  Modeling a synthetic multicellular clock: repressilators coupled by quorum sensing.

Authors:  Jordi Garcia-Ojalvo; Michael B Elowitz; Steven H Strogatz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-15       Impact factor: 11.205

3.  Dynamical quorum sensing: Population density encoded in cellular dynamics.

Authors:  Silvia De Monte; Francesco d'Ovidio; Sune Danø; Preben Graae Sørensen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

4.  Dynamical quorum sensing and synchronization in large populations of chemical oscillators.

Authors:  Annette F Taylor; Mark R Tinsley; Fang Wang; Zhaoyang Huang; Kenneth Showalter
Journal:  Science       Date:  2009-01-30       Impact factor: 47.728

5.  Synchronizing genetic relaxation oscillators by intercell signaling.

Authors:  David McMillen; Nancy Kopell; Jeff Hasty; J J Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

6.  Global convergence of quorum-sensing networks.

Authors:  Giovanni Russo; Jean Jacques E Slotine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-10-25

Review 7.  Approaching the molecular origins of collective dynamics in oscillating cell populations.

Authors:  Pankaj Mehta; Thomas Gregor
Journal:  Curr Opin Genet Dev       Date:  2010-10-09       Impact factor: 5.578

8.  The onset of collective behavior in social amoebae.

Authors:  Thomas Gregor; Koichi Fujimoto; Noritaka Masaki; Satoshi Sawai
Journal:  Science       Date:  2010-04-22       Impact factor: 47.728

9.  Delay-induced degrade-and-fire oscillations in small genetic circuits.

Authors:  William Mather; Matthew R Bennett; Jeff Hasty; Lev S Tsimring
Journal:  Phys Rev Lett       Date:  2009-02-13       Impact factor: 9.161

10.  A synchronized quorum of genetic clocks.

Authors:  Tal Danino; Octavio Mondragón-Palomino; Lev Tsimring; Jeff Hasty
Journal:  Nature       Date:  2010-01-21       Impact factor: 49.962

  10 in total
  8 in total

1.  Modeling oscillations and spiral waves in Dictyostelium populations.

Authors:  Javad Noorbakhsh; David J Schwab; Allyson E Sgro; Thomas Gregor; Pankaj Mehta
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-06-15

2.  Synchronization of degrade-and-fire oscillations via a common activator.

Authors:  William Mather; Jeff Hasty; Lev S Tsimring
Journal:  Phys Rev Lett       Date:  2014-09-16       Impact factor: 9.161

3.  Secreting and sensing the same molecule allows cells to achieve versatile social behaviors.

Authors:  Hyun Youk; Wendell A Lim
Journal:  Science       Date:  2014-02-07       Impact factor: 47.728

4.  Arnold tongues in oscillator systems with nonuniform spatial driving.

Authors:  Alexander Golden; Allyson E Sgro; Pankaj Mehta
Journal:  Phys Rev E       Date:  2021-04       Impact factor: 2.529

5.  From intracellular signaling to population oscillations: bridging size- and time-scales in collective behavior.

Authors:  Allyson E Sgro; David J Schwab; Javad Noorbakhsh; Troy Mestler; Pankaj Mehta; Thomas Gregor
Journal:  Mol Syst Biol       Date:  2015-01-23       Impact factor: 11.429

6.  Sustainability of Transient Kinetic Regimes and Origins of Death.

Authors:  Dmitry Yu Zubarev; Leonardo A Pachón
Journal:  Sci Rep       Date:  2016-02-08       Impact factor: 4.379

7.  Partial synchronisation of glycolytic oscillations in yeast cell populations.

Authors:  André Weber; Werner Zuschratter; Marcus J B Hauser
Journal:  Sci Rep       Date:  2020-11-12       Impact factor: 4.379

8.  Modeling of the ComRS Signaling Pathway Reveals the Limiting Factors Controlling Competence in Streptococcus thermophilus.

Authors:  Laurie Haustenne; Georges Bastin; Pascal Hols; Laetitia Fontaine
Journal:  Front Microbiol       Date:  2015-12-22       Impact factor: 5.640

  8 in total

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