Literature DB >> 23076240

Influenza virus surveillance using surface plasmon resonance.

Emi Suenaga1, Hiroshi Mizuno, Penmetcha K R Kumar.   

Abstract

The hemagglutinin (HA) proteins derived from avian influenza viruses bind specifically to the α2-3 sialoglycan (Sia glycan), whereas human-adapted influenza viruses prefer to bind to the α2-6 Sia glycan. A switch of glycan specificity from α2-3 Sia glycan to α2-6 Sia glycan appears to be critical for a virus to become pandemic, therefore, it is important to monitor the influenza virus adaptation to glycan binding. In this article, we described surface plasmon resonance (SPR) methodology for reliable analyses of HA-glycan interactions. The methodology explores the synthetic tetravalent glycans (α2-3 Sia glycan and α2-6 Sia glycans) which facilitates not only the surface capacity of the sensor chip for better SPR signal but also enhance the affinity to the HA resulting an improved sensitivity. To adopt this method routinely for multiple samples of HA or virus, CAP-chip was adopted so that the regeneration of the sensor chip can be achieved. By combining the above developments with BiacoreT100 device, it is possible to program for analyzing multiple samples in continuous fashion under closed environment. Taken together we believe the above methodology is useful in influenza surveillance to monitor the HA adaptations to glycans among influenza viruses.

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Year:  2012        PMID: 23076240      PMCID: PMC3490956          DOI: 10.4161/viru.21822

Source DB:  PubMed          Journal:  Virulence        ISSN: 2150-5594            Impact factor:   5.882


  29 in total

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2.  Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus.

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Journal:  Science       Date:  2006-03-16       Impact factor: 47.728

3.  The next influenza pandemic: can it be predicted?

Authors:  Jeffery K Taubenberger; David M Morens; Anthony S Fauci
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4.  Structures of receptor complexes formed by hemagglutinins from the Asian Influenza pandemic of 1957.

Authors:  Junfeng Liu; David J Stevens; Lesley F Haire; Philip A Walker; Peter J Coombs; Rupert J Russell; Steven J Gamblin; John J Skehel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-28       Impact factor: 11.205

Review 5.  Label-free analysis of biomolecular interactions using SPR imaging.

Authors:  Voula Kodoyianni
Journal:  Biotechniques       Date:  2011-01       Impact factor: 1.993

6.  Evolution of the hemagglutinin of equine H3 influenza viruses.

Authors:  Y Kawaoka; W J Bean; R G Webster
Journal:  Virology       Date:  1989-04       Impact factor: 3.616

7.  On the origin of the human influenza virus subtypes H2N2 and H3N2.

Authors:  C Scholtissek; W Rohde; V Von Hoyningen; R Rott
Journal:  Virology       Date:  1978-06-01       Impact factor: 3.616

8.  Structures of receptor complexes of a North American H7N2 influenza hemagglutinin with a loop deletion in the receptor binding site.

Authors:  Hua Yang; Li-Mei Chen; Paul J Carney; Ruben O Donis; James Stevens
Journal:  PLoS Pathog       Date:  2010-09-02       Impact factor: 6.823

9.  Binding kinetics of influenza viruses to sialic acid-containing carbohydrates.

Authors:  Kazuya I P J Hidari; Shizumi Shimada; Yasuo Suzuki; Takashi Suzuki
Journal:  Glycoconj J       Date:  2007-07-11       Impact factor: 2.916

10.  Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans.

Authors:  Rebecca J Garten; C Todd Davis; Colin A Russell; Bo Shu; Stephen Lindstrom; Amanda Balish; Wendy M Sessions; Xiyan Xu; Eugene Skepner; Varough Deyde; Margaret Okomo-Adhiambo; Larisa Gubareva; John Barnes; Catherine B Smith; Shannon L Emery; Michael J Hillman; Pierre Rivailler; James Smagala; Miranda de Graaf; David F Burke; Ron A M Fouchier; Claudia Pappas; Celia M Alpuche-Aranda; Hugo López-Gatell; Hiram Olivera; Irma López; Christopher A Myers; Dennis Faix; Patrick J Blair; Cindy Yu; Kimberly M Keene; P David Dotson; David Boxrud; Anthony R Sambol; Syed H Abid; Kirsten St George; Tammy Bannerman; Amanda L Moore; David J Stringer; Patricia Blevins; Gail J Demmler-Harrison; Michele Ginsberg; Paula Kriner; Steve Waterman; Sandra Smole; Hugo F Guevara; Edward A Belongia; Patricia A Clark; Sara T Beatrice; Ruben Donis; Jacqueline Katz; Lyn Finelli; Carolyn B Bridges; Michael Shaw; Daniel B Jernigan; Timothy M Uyeki; Derek J Smith; Alexander I Klimov; Nancy J Cox
Journal:  Science       Date:  2009-05-22       Impact factor: 47.728

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  5 in total

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3.  Optical Detection of CoV-SARS-2 Viral Proteins to Sub-Picomolar Concentrations.

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Review 4.  Membrane attachment and fusion of HIV-1, influenza A, and SARS-CoV-2: resolving the mechanisms with biophysical methods.

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Journal:  Biophys Rev       Date:  2022-10-11

Review 5.  Monitoring Intact Viruses Using Aptamers.

Authors:  Penmetcha K R Kumar
Journal:  Biosensors (Basel)       Date:  2016-08-04
  5 in total

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