Literature DB >> 23065976

Gateway role for rRNA precursors in ribosome assembly.

Nancy S Gutgsell1, Chaitanya Jain.   

Abstract

In Escherichia coli, rRNAs are initially transcribed with precursor sequences, which are subsequently removed through processing reactions. To investigate the role of precursor sequences, we analyzed ribosome assembly in strains containing mutations in the processing RNases. We observed that defects in 23S rRNA processing resulted in an accumulation of ribosomal subunits and caused a significant delay in ribosome assembly. These observations suggest that precursor residues in 23S rRNA control ribosome assembly and could be serving a regulatory role to couple ribosome assembly to rRNA processing. The possible mechanisms through which rRNA processing and ribosome assembly could be linked are discussed.

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Year:  2012        PMID: 23065976      PMCID: PMC3510557          DOI: 10.1128/JB.01467-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  30 in total

1.  RNase G (CafA protein) and RNase E are both required for the 5' maturation of 16S ribosomal RNA.

Authors:  Z Li; S Pandit; M P Deutscher
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

Review 2.  rRNA transcription in Escherichia coli.

Authors:  Brian J Paul; Wilma Ross; Tamas Gaal; Richard L Gourse
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

3.  Structures of the bacterial ribosome at 3.5 A resolution.

Authors:  Barbara S Schuwirth; Maria A Borovinskaya; Cathy W Hau; Wen Zhang; Antón Vila-Sanjurjo; James M Holton; Jamie H Doudna Cate
Journal:  Science       Date:  2005-11-04       Impact factor: 47.728

4.  Functional defects in transfer RNAs lead to the accumulation of ribosomal RNA precursors.

Authors:  Jacoba G Slagter-Jäger; Leopold Puzis; Nancy S Gutgsell; Marlene Belfort; Chaitanya Jain
Journal:  RNA       Date:  2007-02-09       Impact factor: 4.942

Review 5.  Maturation and degradation of ribosomal RNA in bacteria.

Authors:  Murray P Deutscher
Journal:  Prog Mol Biol Transl Sci       Date:  2009       Impact factor: 3.622

Review 6.  Ribosome biogenesis and the translation process in Escherichia coli.

Authors:  Magdalena Kaczanowska; Monica Rydén-Aulin
Journal:  Microbiol Mol Biol Rev       Date:  2007-09       Impact factor: 11.056

Review 7.  Degradation of mRNA in Escherichia coli: an old problem with some new twists.

Authors:  G A Coburn; G A Mackie
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1999

8.  The E. coli RhlE RNA helicase regulates the function of related RNA helicases during ribosome assembly.

Authors:  Chaitanya Jain
Journal:  RNA       Date:  2007-12-14       Impact factor: 4.942

Review 9.  The ribosomal subunit assembly line.

Authors:  Mensur Dlakić
Journal:  Genome Biol       Date:  2005-09-19       Impact factor: 13.583

10.  Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.

Authors:  Tomoya Baba; Takeshi Ara; Miki Hasegawa; Yuki Takai; Yoshiko Okumura; Miki Baba; Kirill A Datsenko; Masaru Tomita; Barry L Wanner; Hirotada Mori
Journal:  Mol Syst Biol       Date:  2006-02-21       Impact factor: 11.429

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  7 in total

1.  RAP, the sole octotricopeptide repeat protein in Arabidopsis, is required for chloroplast 16S rRNA maturation.

Authors:  Laura Kleinknecht; Fei Wang; Roland Stübe; Katrin Philippar; Jörg Nickelsen; Alexandra-Viola Bohne
Journal:  Plant Cell       Date:  2014-02-28       Impact factor: 11.277

2.  RNase III Processing of rRNA in the Lyme Disease Spirochete Borrelia burgdorferi.

Authors:  Melissa L Anacker; Dan Drecktrah; Richard D LeCoultre; Meghan Lybecker; D Scott Samuels
Journal:  J Bacteriol       Date:  2018-06-11       Impact factor: 3.490

3.  Expression of the DeaD RNA Helicase Is Regulated at Multiple Levels through Its Long mRNA 5' Untranslated Region.

Authors:  Sandeep Ojha; Chaitanya Jain
Journal:  J Bacteriol       Date:  2022-01-18       Impact factor: 3.476

4.  PCR Primer Design for 16S rRNAs for Experimental Horizontal Gene Transfer Test in Escherichia coli.

Authors:  Kentaro Miyazaki; Mitsuharu Sato; Miyuki Tsukuda
Journal:  Front Bioeng Biotechnol       Date:  2017-02-28

5.  Role of ribosome assembly in Escherichia coli ribosomal RNA degradation.

Authors:  Chaitanya Jain
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

6.  Studies on the assembly characteristics of large subunit ribosomal proteins in S. cerevisae.

Authors:  Uli Ohmayer; Michael Gamalinda; Martina Sauert; Julius Ossowski; Gisela Pöll; Jan Linnemann; Thomas Hierlmeier; Jorge Perez-Fernandez; Beril Kumcuoglu; Isabelle Leger-Silvestre; Marlène Faubladier; Joachim Griesenbeck; John Woolford; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2013-07-10       Impact factor: 3.240

7.  Dual-level autoregulation of the E. coli DeaD RNA helicase via mRNA stability and Rho-dependent transcription termination.

Authors:  Sandeep Ojha; Chaitanya Jain
Journal:  RNA       Date:  2020-05-15       Impact factor: 4.942

  7 in total

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