Literature DB >> 23064203

RNA editing in eag potassium channels: biophysical consequences of editing a conserved S6 residue.

Mary Y Ryan1, Rachel Maloney, Jeffrey D Fineberg, Robert A Reenan, Richard Horn.   

Abstract

RNA editing at four sites in eag, a Drosophila voltage-gated potassium channel, results in the substitution of amino acids into the final protein product that are not encoded by the genome. These sites and the editing alterations introduced are K467R (Site 1, top of the S6 segment), Y548C, N567D and K699R (sites 2-4, within the cytoplasmic C-terminal domain). We mutated these residues individually and expressed the channels in Xenopus oocytes. A fully edited construct (all four sites) has the slowest activation kinetics and a paucity of inactivation, whereas the fully unedited channel exhibits the fastest activation and most dramatic inactivation. Editing Site 1 inhibits steady-state inactivation. Mutating Site 1 to the neutral residues resulted in intermediate inactivation phenotypes and a leftward shift of the peak current-voltage relationship. Activation kinetics display a Cole-Moore shift that is enhanced by RNA editing. Normalized open probability relationships for 467Q, 467R and 467K are superimposable, indicating little effect of the mutations on steady-state activation. 467Q and 467R enhance instantaneous inward rectification, indicating a role of this residue in ion permeation. Intracellular tetrabutylammonium blocks 467K significantly better than 467R. Block by intracellular, but not extracellular, tetraethylammonium interferes with inactivation. The fraction of inactivated current is reduced at higher extracellular Mg(+2) concentrations, and channels edited at Site 1 are more sensitive to changes in extracellular Mg(+2) than unedited channels. These results show that even a minor change in amino acid side-chain chemistry and size can have a dramatic impact on channel biophysics, and that RNA editing is important for fine-tuning the channel's function.

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Year:  2012        PMID: 23064203      PMCID: PMC3536729          DOI: 10.4161/chan.22314

Source DB:  PubMed          Journal:  Channels (Austin)        ISSN: 1933-6950            Impact factor:   2.581


  25 in total

Review 1.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

2.  Engineered alterations in RNA editing modulate complex behavior in Drosophila: regulatory diversity of adenosine deaminase acting on RNA (ADAR) targets.

Authors:  James E C Jepson; Yiannis A Savva; Chio Yokose; Arthur U Sugden; Asli Sahin; Robert A Reenan
Journal:  J Biol Chem       Date:  2010-11-15       Impact factor: 5.157

3.  Electrostatic contributions of aromatic residues in the local anesthetic receptor of voltage-gated sodium channels.

Authors:  Christopher A Ahern; Amy L Eastwood; Dennis A Dougherty; Richard Horn
Journal:  Circ Res       Date:  2007-10-25       Impact factor: 17.367

4.  RNA editing underlies temperature adaptation in K+ channels from polar octopuses.

Authors:  Sandra Garrett; Joshua J C Rosenthal
Journal:  Science       Date:  2012-01-05       Impact factor: 47.728

5.  Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment.

Authors:  Stephen B Long; Xiao Tao; Ernest B Campbell; Roderick MacKinnon
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

6.  Characterization of five RNA editing sites in Shab potassium channels.

Authors:  Mary Y Ryan; Rachel Maloney; Robert Reenan; Richard Horn
Journal:  Channels (Austin)       Date:  2008-05-02       Impact factor: 2.581

7.  Absence of direct cyclic nucleotide modulation of mEAG1 and hERG1 channels revealed with fluorescence and electrophysiological methods.

Authors:  Tinatin I Brelidze; Anne E Carlson; William N Zagotta
Journal:  J Biol Chem       Date:  2009-08-11       Impact factor: 5.157

8.  Extracellular Mg(2+) modulates slow gating transitions and the opening of Drosophila ether-à-Go-Go potassium channels.

Authors:  C Y Tang; F Bezanilla; D M Papazian
Journal:  J Gen Physiol       Date:  2000-03       Impact factor: 4.086

9.  Mg(2+) modulates voltage-dependent activation in ether-à-go-go potassium channels by binding between transmembrane segments S2 and S3.

Authors:  W R Silverman; C Y Tang; A F Mock; K B Huh; D M Papazian
Journal:  J Gen Physiol       Date:  2000-11       Impact factor: 4.086

10.  Regulated RNA editing and functional epistasis in Shaker potassium channels.

Authors:  Lindsey Ingleby; Rachel Maloney; James Jepson; Richard Horn; Robert Reenan
Journal:  J Gen Physiol       Date:  2009-01       Impact factor: 4.086

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  9 in total

Review 1.  The emerging role of RNA editing in plasticity.

Authors:  Joshua J C Rosenthal
Journal:  J Exp Biol       Date:  2015-06       Impact factor: 3.312

2.  Generation and characterization of new alleles of quiver (qvr) that encodes an extracellular modulator of the Shaker potassium channel.

Authors:  Hongyu Ruan; Atsushi Ueda; Xiaomin Xing; Xuxuan Wan; Benjamin Strub; Spencer Mukai; Kaan Certel; David Green; Kyle Belozerov; Wei-Dong Yao; Wayne Johnson; Jim Jung-Ching Lin; Arthur J Hilliker; Chun-Fang Wu
Journal:  J Neurogenet       Date:  2017-11-09       Impact factor: 1.250

Review 3.  The ADAR protein family.

Authors:  Yiannis A Savva; Leila E Rieder; Robert A Reenan
Journal:  Genome Biol       Date:  2012-12-28       Impact factor: 13.583

Review 4.  Targeting potassium channels in cancer.

Authors:  Xi Huang; Lily Yeh Jan
Journal:  J Cell Biol       Date:  2014-07-21       Impact factor: 10.539

5.  Dynamic response of RNA editing to temperature in Drosophila.

Authors:  Leila E Rieder; Yiannis A Savva; Matthew A Reyna; Yao-Jen Chang; Jacquelyn S Dorsky; Ali Rezaei; Robert A Reenan
Journal:  BMC Biol       Date:  2015-01-03       Impact factor: 7.431

Review 6.  The evolution and adaptation of A-to-I RNA editing.

Authors:  Arielle L Yablonovitch; Patricia Deng; Dionna Jacobson; Jin Billy Li
Journal:  PLoS Genet       Date:  2017-11-28       Impact factor: 5.917

7.  The intrinsically liganded cyclic nucleotide-binding homology domain promotes KCNH channel activation.

Authors:  Yaxian Zhao; Marcel P Goldschen-Ohm; João H Morais-Cabral; Baron Chanda; Gail A Robertson
Journal:  J Gen Physiol       Date:  2017-01-25       Impact factor: 4.086

8.  RNA editing is abundant and correlates with task performance in a social bumblebee.

Authors:  Hagit T Porath; Esther Hazan; Hagai Shpigler; Mira Cohen; Mark Band; Yehuda Ben-Shahar; Erez Y Levanon; Eli Eisenberg; Guy Bloch
Journal:  Nat Commun       Date:  2019-04-08       Impact factor: 14.919

9.  The Landscape of A-to-I RNA Editome Is Shaped by Both Positive and Purifying Selection.

Authors:  Yao Yu; Hongxia Zhou; Yimeng Kong; Bohu Pan; Longxian Chen; Hongbing Wang; Pei Hao; Xuan Li
Journal:  PLoS Genet       Date:  2016-07-28       Impact factor: 5.917

  9 in total

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