Literature DB >> 23064115

Emerging views about the molecular structure of the spliceosomal catalytic center.

Jana Schmitzová1, Vladimir Pena.   

Abstract

Pre-mRNA splicing occurs in two chemical steps that are catalyzed by a large, dynamic RNA-protein complex called the spliceosome. Initially assembled in a catalytically inactive form, the spliceosome undergoes massive compositional and conformational remodeling, through which disparate RNA elements are re-configured and juxtaposed into a functional catalytic center. The intricate construction of the catalytic center requires the assistance of spliceosomal proteins. Recent structure-function analyses have demonstrated that the yeast-splicing factor Cwc2 is a main player that contacts and shapes the catalytic center of the spliceosome into a functional conformation. With this advance, corroborated by the atomic structure of the evolutionarily related group IIC introns, our understanding of the organization and formation of the spliceosomal catalytic center has progressed to a new level.

Entities:  

Keywords:  Cwc2; Domain V; Prp8; RNA splicing; RNA tertiary interactions; RNA-protein interaction; U6-ISL; group II introns; spliceosome; splicing catalysis

Mesh:

Substances:

Year:  2012        PMID: 23064115      PMCID: PMC3597571          DOI: 10.4161/rna.22359

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  42 in total

1.  Metal ion catalysis during the exon-ligation step of nuclear pre-mRNA splicing: extending the parallels between the spliceosome and group II introns.

Authors:  P M Gordon; E J Sontheimer; J A Piccirilli
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

2.  Mechanism of maturase-promoted group II intron splicing.

Authors:  M Matsuura; J W Noah; A M Lambowitz
Journal:  EMBO J       Date:  2001-12-17       Impact factor: 11.598

3.  Splicing-related catalysis by protein-free snRNAs.

Authors:  S Valadkhan; J L Manley
Journal:  Nature       Date:  2001-10-18       Impact factor: 49.962

Review 4.  Spliceosomal snRNAs: Mg(2+)-dependent chemistry at the catalytic core?

Authors:  Tommaso Villa; Jeffrey A Pleiss; Christine Guthrie
Journal:  Cell       Date:  2002-04-19       Impact factor: 41.582

5.  A catalytically active group II intron domain 5 can function in the U12-dependent spliceosome.

Authors:  Girish C Shukla; Richard A Padgett
Journal:  Mol Cell       Date:  2002-05       Impact factor: 17.970

6.  A group II intron-encoded maturase functions preferentially in cis and requires both the reverse transcriptase and X domains to promote RNA splicing.

Authors:  Xiaoxia Cui; Manabu Matsuura; Qin Wang; Hongwen Ma; Alan M Lambowitz
Journal:  J Mol Biol       Date:  2004-07-02       Impact factor: 5.469

7.  Multiple functions for the invariant AGC triad of U6 snRNA.

Authors:  Angela K Hilliker; Jonathan P Staley
Journal:  RNA       Date:  2004-06       Impact factor: 4.942

8.  The generality of self-splicing RNA: relationship to nuclear mRNA splicing.

Authors:  T R Cech
Journal:  Cell       Date:  1986-01-31       Impact factor: 41.582

9.  Metal-ion coordination by U6 small nuclear RNA contributes to catalysis in the spliceosome.

Authors:  S L Yean; G Wuenschell; J Termini; R J Lin
Journal:  Nature       Date:  2000-12-14       Impact factor: 49.962

10.  Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif.

Authors:  Roland K O Sigel; Dipali G Sashital; Dana L Abramovitz; Arthur G Palmer; Samuel E Butcher; Anna Marie Pyle
Journal:  Nat Struct Mol Biol       Date:  2004-01-25       Impact factor: 15.369

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  1 in total

Review 1.  RBM22, a Key Player of Pre-mRNA Splicing and Gene Expression Regulation, Is Altered in Cancer.

Authors:  Benoît Soubise; Yan Jiang; Nathalie Douet-Guilbert; Marie-Bérengère Troadec
Journal:  Cancers (Basel)       Date:  2022-01-27       Impact factor: 6.639

  1 in total

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