Literature DB >> 11743002

Mechanism of maturase-promoted group II intron splicing.

M Matsuura1, J W Noah, A M Lambowitz.   

Abstract

Mobile group II introns encode reverse transcriptases that also function as intron-specific splicing factors (maturases). We showed previously that the reverse transcriptase/maturase encoded by the Lactococcus lactis Ll.LtrB intron has a high affinity binding site at the beginning of its own coding region in an idiosyncratic structure, DIVa. Here, we identify potential secondary binding sites in conserved regions of the catalytic core and show via chemical modification experiments that binding of the maturase induces the formation of key tertiary interactions required for RNA splicing. The interaction with conserved as well as idiosyncratic regions explains how maturases in some organisms could evolve into general group II intron splicing factors, potentially mirroring a key step in the evolution of spliceosomal introns.

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Year:  2001        PMID: 11743002      PMCID: PMC125332          DOI: 10.1093/emboj/20.24.7259

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  20 in total

1.  Visualizing the solvent-inaccessible core of a group II intron ribozyme.

Authors:  J Swisher; C M Duarte; L J Su; A M Pyle
Journal:  EMBO J       Date:  2001-04-17       Impact factor: 11.598

2.  A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA.

Authors:  H Wank; J SanFilippo; R N Singh; M Matsuura; A M Lambowitz
Journal:  Mol Cell       Date:  1999-08       Impact factor: 17.970

3.  Retrotransposition of a yeast group II intron occurs by reverse splicing directly into ectopic DNA sites.

Authors:  L Dickson; H R Huang; L Liu; M Matsuura; A M Lambowitz; P S Perlman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-30       Impact factor: 11.205

4.  Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases.

Authors:  N Toor; G Hausner; S Zimmerly
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

5.  A group III twintron encoding a maturase-like gene excises through lariat intermediates.

Authors:  D W Copertino; E T Hall; F W Van Hook; K P Jenkins; R B Hallick
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971

Review 6.  Structure and activities of group II introns.

Authors:  F Michel; J L Ferat
Journal:  Annu Rev Biochem       Date:  1995       Impact factor: 23.643

Review 7.  Retrohoming: cDNA-mediated mobility of group II introns requires a catalytic RNA.

Authors:  M J Curcio; M Belfort
Journal:  Cell       Date:  1996-01-12       Impact factor: 41.582

8.  Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant.

Authors:  K H Wolfe; C W Morden; J D Palmer
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

9.  Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function.

Authors:  G Mohr; P S Perlman; A M Lambowitz
Journal:  Nucleic Acids Res       Date:  1993-11-11       Impact factor: 16.971

10.  Frequent use of the same tertiary motif by self-folding RNAs.

Authors:  M Costa; F Michel
Journal:  EMBO J       Date:  1995-03-15       Impact factor: 11.598

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  78 in total

1.  High-affinity binding site for a group II intron-encoded reverse transcriptase/maturase within a stem-loop structure in the intron RNA.

Authors:  Kazuo Watanabe; Alan M Lambowitz
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

2.  In vivo selection reveals combinatorial controls that define a critical exon in the spinal muscular atrophy genes.

Authors:  Natalia N Singh; Elliot J Androphy; Ravindra N Singh
Journal:  RNA       Date:  2004-08       Impact factor: 4.942

3.  Principles of 3' splice site selection and alternative splicing for an unusual group II intron from Bacillus anthracis.

Authors:  Aaron R Robart; Nancy Kristine Montgomery; Kimothy L Smith; Steven Zimmerly
Journal:  RNA       Date:  2004-05       Impact factor: 4.942

4.  A conjugation-based system for genetic analysis of group II intron splicing in Lactococcus lactis.

Authors:  Joanna R Klein; Yuqing Chen; Dawn A Manias; Jin Zhuo; Liang Zhou; Craig L Peebles; Gary M Dunny
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

5.  Contribution of base-pairing interactions between group II intron fragments during trans-splicing in vivo.

Authors:  Cecilia Quiroga; Lisa Kronstad; Christine Ritlop; Audrey Filion; Benoit Cousineau
Journal:  RNA       Date:  2011-10-27       Impact factor: 4.942

6.  An antisense microwalk reveals critical role of an intronic position linked to a unique long-distance interaction in pre-mRNA splicing.

Authors:  Natalia N Singh; Katrin Hollinger; Dhruva Bhattacharya; Ravindra N Singh
Journal:  RNA       Date:  2010-04-22       Impact factor: 4.942

Review 7.  Group II introns: mobile ribozymes that invade DNA.

Authors:  Alan M Lambowitz; Steven Zimmerly
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-08-01       Impact factor: 10.005

8.  A DEAD-box protein alone promotes group II intron splicing and reverse splicing by acting as an RNA chaperone.

Authors:  Sabine Mohr; Manabu Matsuura; Philip S Perlman; Alan M Lambowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

9.  The splicing of yeast mitochondrial group I and group II introns requires a DEAD-box protein with RNA chaperone function.

Authors:  Hon-Ren Huang; Claire E Rowe; Sabine Mohr; Yue Jiang; Alan M Lambowitz; Philip S Perlman
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-23       Impact factor: 11.205

Review 10.  Structural Insights into the Mechanism of Group II Intron Splicing.

Authors:  Chen Zhao; Anna Marie Pyle
Journal:  Trends Biochem Sci       Date:  2017-04-21       Impact factor: 13.807

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