Literature DB >> 23062334

Mechanical activation of cells induces chromatin remodeling preceding MKL nuclear transport.

K Venkatesan Iyer1, S Pulford, A Mogilner, G V Shivashankar.   

Abstract

For cells to adapt to different tissues and changes in tissue mechanics, they must be able to respond to mechanical cues by changing their gene expression patterns. Biochemical signaling pathways for these responses have been elucidated, and recent evidence points to the involvement of force-induced deformation of the nucleus. However, it is still unclear how physical cues received at the plasma membrane (PM) spatiotemporally integrate to the functional chromatin organization of the cell nucleus. To investigate this issue, we applied mechanical forces through magnetic particles adhered to the PM of single cells and mapped the accompanying changes in actin polymerization, nuclear morphology, chromatin remodeling, and nuclear transport of soluble signaling intermediates using high-resolution fluorescence anisotropy imaging. Using this approach, we show the timescales associated with force-induced polymerization of actin and changes in the F/G actin ratio resulting in nuclear translocation of the G-actin-associated transcriptional cofactor, megakaryoblastic acute leukemia factor-1 (MKL). Further, this method of measuring nuclear organization at high spatiotemporal resolution with simultaneous force application revealed the physical propagation of forces to the nucleus, resulting in changes to chromatin organization, followed by nuclear deformation. We also describe a quantitative model that incorporates active stresses and chemical kinetics to evaluate the observed timescales. Our work suggests that mechanical activation of cells is accompanied by distinct timescales involved in the reorganization of actin and chromatin assembly, followed by translocation of transcription cofactors from the cytoplasm to the nucleus.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23062334      PMCID: PMC3471483          DOI: 10.1016/j.bpj.2012.08.041

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  55 in total

1.  Dynamic force-induced direct dissociation of protein complexes in a nuclear body in living cells.

Authors:  Yeh-Chuin Poh; Sergey P Shevtsov; Farhan Chowdhury; Douglas C Wu; Sungsoo Na; Miroslav Dundr; Ning Wang
Journal:  Nat Commun       Date:  2012-05-29       Impact factor: 14.919

2.  Viscoelastic retraction of single living stress fibers and its impact on cell shape, cytoskeletal organization, and extracellular matrix mechanics.

Authors:  Sanjay Kumar; Iva Z Maxwell; Alexander Heisterkamp; Thomas R Polte; Tanmay P Lele; Matthew Salanga; Eric Mazur; Donald E Ingber
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

3.  Chromatin structure exhibits spatio-temporal heterogeneity within the cell nucleus.

Authors:  Bidisha Banerjee; Dipanjan Bhattacharya; G V Shivashankar
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

4.  EGFP-tagged core and linker histones diffuse via distinct mechanisms within living cells.

Authors:  Dipanjan Bhattacharya; Aprotim Mazumder; S Annie Miriam; G V Shivashankar
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

Review 5.  Local force and geometry sensing regulate cell functions.

Authors:  Viola Vogel; Michael Sheetz
Journal:  Nat Rev Mol Cell Biol       Date:  2006-04       Impact factor: 94.444

6.  Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.

Authors:  Eran Meshorer; Dhananjay Yellajoshula; Eric George; Peter J Scambler; David T Brown; Tom Misteli
Journal:  Dev Cell       Date:  2006-01       Impact factor: 12.270

Review 7.  SUN-domain proteins: 'Velcro' that links the nucleoskeleton to the cytoskeleton.

Authors:  Yonatan B Tzur; Katherine L Wilson; Yosef Gruenbaum
Journal:  Nat Rev Mol Cell Biol       Date:  2006-08-23       Impact factor: 94.444

8.  Direct measurement of local chromatin fluidity using optical trap modulation force spectroscopy.

Authors:  T Roopa; G V Shivashankar
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

9.  SUN1 interacts with nuclear lamin A and cytoplasmic nesprins to provide a physical connection between the nuclear lamina and the cytoskeleton.

Authors:  Farhana Haque; David J Lloyd; Dawn T Smallwood; Carolyn L Dent; Catherine M Shanahan; Andrew M Fry; Richard C Trembath; Sue Shackleton
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

10.  Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation.

Authors:  Wolfgang Fischle; Boo Shan Tseng; Holger L Dormann; Beatrix M Ueberheide; Benjamin A Garcia; Jeffrey Shabanowitz; Donald F Hunt; Hironori Funabiki; C David Allis
Journal:  Nature       Date:  2005-10-12       Impact factor: 49.962

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  69 in total

1.  Nuclear deformability and telomere dynamics are regulated by cell geometric constraints.

Authors:  Ekta Makhija; D S Jokhun; G V Shivashankar
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-22       Impact factor: 11.205

2.  Direct measurement of intranuclear strain distributions and RNA synthesis in single cells embedded within native tissue.

Authors:  Jonathan T Henderson; Garrett Shannon; Alexander I Veress; Corey P Neu
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

Review 3.  Stem cell mechanobiology: diverse lessons from bone marrow.

Authors:  Irena L Ivanovska; Jae-Won Shin; Joe Swift; Dennis E Discher
Journal:  Trends Cell Biol       Date:  2015-06-02       Impact factor: 20.808

4.  Mechanical stimulation induces formin-dependent assembly of a perinuclear actin rim.

Authors:  Xiaowei Shao; Qingsen Li; Alex Mogilner; Alexander D Bershadsky; G V Shivashankar
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-04       Impact factor: 11.205

5.  Cell geometry dictates TNFα-induced genome response.

Authors:  Aninda Mitra; Saradha Venkatachalapathy; Prasuna Ratna; Yejun Wang; Doorgesh Sharma Jokhun; G V Shivashankar
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

Review 6.  Topography design concept of a tissue engineering scaffold for controlling cell function and fate through actin cytoskeletal modulation.

Authors:  Hiromi Miyoshi; Taiji Adachi
Journal:  Tissue Eng Part B Rev       Date:  2014-07-31       Impact factor: 6.389

7.  Mechanically Induced Chromatin Condensation Requires Cellular Contractility in Mesenchymal Stem Cells.

Authors:  Su-Jin Heo; Woojin M Han; Spencer E Szczesny; Brian D Cosgrove; Dawn M Elliott; David A Lee; Randall L Duncan; Robert L Mauck
Journal:  Biophys J       Date:  2016-08-23       Impact factor: 4.033

8.  Geometric control and modeling of genome reprogramming.

Authors:  Caroline Uhler; G V Shivashankar
Journal:  Bioarchitecture       Date:  2016-07-19

Review 9.  A Crowdsourced nucleus: understanding nuclear organization in terms of dynamically networked protein function.

Authors:  Ashley M Wood; Arturo G Garza-Gongora; Steven T Kosak
Journal:  Biochim Biophys Acta       Date:  2014-01-09

10.  Nuclear lamins in cancer.

Authors:  Jerome Irianto; Charlotte R Pfeifer; Irena L Ivanovska; Joe Swift; Dennis E Discher
Journal:  Cell Mol Bioeng       Date:  2016-04-18       Impact factor: 2.321

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