Literature DB >> 23058244

Epialleles in plant evolution.

Detlef Weigel, Vincent Colot.   

Abstract

Heritable phenotypic differences caused by epigenetic modifications, rather than DNA sequence mutations, pose a challenge to our understanding of natural variation. Here, we review what is known about plant epialleles and the role of epigenetics in evolution.

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Mesh:

Year:  2012        PMID: 23058244      PMCID: PMC3491404          DOI: 10.1186/gb-2012-13-10-249

Source DB:  PubMed          Journal:  Genome Biol        ISSN: 1474-7596            Impact factor:   13.583


  49 in total

1.  An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis.

Authors:  B Luff; L Pawlowski; J Bender
Journal:  Mol Cell       Date:  1999-04       Impact factor: 17.970

2.  The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene.

Authors:  W J Soppe; S E Jacobsen; C Alonso-Blanco; J P Jackson; T Kakutani; M Koornneef; A J Peeters
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

3.  Epigenetic variation in plant responses to defence hormones.

Authors:  Vít Latzel; Yuanye Zhang; Kim Karlsson Moritz; Markus Fischer; Oliver Bossdorf
Journal:  Ann Bot       Date:  2012-04-26       Impact factor: 4.357

4.  Somatically heritable switches in the DNA modification of Mu transposable elements monitored with a suppressible mutant in maize.

Authors:  R Martienssen; A Barkan; W C Taylor; M Freeling
Journal:  Genes Dev       Date:  1990-03       Impact factor: 11.361

5.  Origin of floral asymmetry in Antirrhinum.

Authors:  D Luo; R Carpenter; C Vincent; L Copsey; E Coen
Journal:  Nature       Date:  1996-10-31       Impact factor: 49.962

6.  Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of Arabidopsis.

Authors:  J Bender; G R Fink
Journal:  Cell       Date:  1995-12-01       Impact factor: 41.582

7.  Molecular organization and germinal instability of R-stippled maize.

Authors:  W B Eggleston; M Alleman; J L Kermicle
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

8.  Genetic characterization of late-flowering traits induced by DNA hypomethylation mutation in Arabidopsis thaliana.

Authors:  T Kakutani
Journal:  Plant J       Date:  1997-12       Impact factor: 6.417

9.  Arabidopsis PAI gene arrangements, cytosine methylation and expression.

Authors:  S Melquist; B Luff; J Bender
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

10.  Role of transposable elements in heterochromatin and epigenetic control.

Authors:  Zachary Lippman; Anne-Valérie Gendrel; Michael Black; Matthew W Vaughn; Neilay Dedhia; W Richard McCombie; Kimberly Lavine; Vivek Mittal; Bruce May; Kristin D Kasschau; James C Carrington; Rebecca W Doerge; Vincent Colot; Rob Martienssen
Journal:  Nature       Date:  2004-07-22       Impact factor: 49.962

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  61 in total

Review 1.  Legume genomics: understanding biology through DNA and RNA sequencing.

Authors:  Jamie A O'Rourke; Yung-Tsi Bolon; Bruna Bucciarelli; Carroll P Vance
Journal:  Ann Bot       Date:  2014-04-25       Impact factor: 4.357

2.  Lack of pairing during meiosis triggers multigenerational transgene silencing in Caenorhabditis elegans.

Authors:  Luciana E Leopold; Bree N Heestand; Soobin Seong; Ludmila Shtessel; Shawn Ahmed
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-04       Impact factor: 11.205

Review 3.  Stochastic developmental variation, an epigenetic source of phenotypic diversity with far-reaching biological consequences.

Authors:  Günter Vogt
Journal:  J Biosci       Date:  2015-03       Impact factor: 1.826

4.  Epigenetic contribution to diversification.

Authors:  Heinrich Bente; Ortrun Mittelsten Scheid
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-24       Impact factor: 11.205

Review 5.  Molecular mechanisms governing differential robustness of development and environmental responses in plants.

Authors:  Jennifer Lachowiec; Christine Queitsch; Daniel J Kliebenstein
Journal:  Ann Bot       Date:  2015-10-14       Impact factor: 4.357

6.  A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.

Authors:  Rui-Qing Li; Jian-Zhong Huang; Hai-Jun Zhao; Hao-Wei Fu; You-Fa Li; Guo-Zhen Liu; Qing-Yao Shu
Journal:  Theor Appl Genet       Date:  2014-09-11       Impact factor: 5.699

Review 7.  Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation.

Authors:  Steven R Eichten; Robert J Schmitz; Nathan M Springer
Journal:  Plant Physiol       Date:  2014-05-28       Impact factor: 8.340

8.  Methylation interactions in Arabidopsis hybrids require RNA-directed DNA methylation and are influenced by genetic variation.

Authors:  Qingzhu Zhang; Dong Wang; Zhaobo Lang; Li He; Lan Yang; Liang Zeng; Yanqiang Li; Cheng Zhao; Huan Huang; Heng Zhang; Huiming Zhang; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-05       Impact factor: 11.205

Review 9.  Epigenetic inheritance, prions and evolution.

Authors:  Johannes Manjrekar
Journal:  J Genet       Date:  2017-07       Impact factor: 1.166

10.  Transposable Element Insertion and Epigenetic Modification Cause the Multiallelic Variation in the Expression of FAE1 in Sinapis alba.

Authors:  Fangqin Zeng; Bifang Cheng
Journal:  Plant Cell       Date:  2014-06-16       Impact factor: 11.277

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