Literature DB >> 26473020

Molecular mechanisms governing differential robustness of development and environmental responses in plants.

Jennifer Lachowiec1, Christine Queitsch2, Daniel J Kliebenstein3.   

Abstract

BACKGROUND: Robustness to genetic and environmental perturbation is a salient feature of multicellular organisms. Loss of developmental robustness can lead to severe phenotypic defects and fitness loss. However, perfect robustness, i.e. no variation at all, is evolutionarily unfit as organisms must be able to change phenotype to properly respond to changing environments and biotic challenges. Plasticity is the ability to adjust phenotypes predictably in response to specific environmental stimuli, which can be considered a transient shift allowing an organism to move from one robust phenotypic state to another. Plants, as sessile organisms that undergo continuous development, are particularly dependent on an exquisite fine-tuning of the processes that balance robustness and plasticity to maximize fitness. SCOPE AND
CONCLUSIONS: This paper reviews recently identified mechanisms, both systems-level and molecular, that modulate robustness, and discusses their implications for the optimization of plant fitness. Robustness in living systems arises from the structure of genetic networks, the specific molecular functions of the underlying genes, and their interactions. This very same network responsible for the robustness of specific developmental states also has to be built such that it enables plastic yet robust shifts in response to environmental changes. In plants, the interactions and functions of signal transduction pathways activated by phytohormones and the tendency for plants to tolerate whole-genome duplications, tandem gene duplication and hybridization are emerging as major regulators of robustness in development. Despite their obvious implications for plant evolution and plant breeding, the mechanistic underpinnings by which plants modulate precise levels of robustness, plasticity and evolvability in networks controlling different phenotypes are under-studied.
© The Author 2015. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  Developmental robustness; Hsp90; canalization; capacitor; chromatin; hormones; network hubs; network motifs; noise; plasticity; rDNA; redundancy; species diversity

Mesh:

Substances:

Year:  2015        PMID: 26473020      PMCID: PMC4845800          DOI: 10.1093/aob/mcv151

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  142 in total

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2.  The evolution of genetic canalization under fluctuating selection.

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3.  Error and attack tolerance of complex networks

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Review 4.  Development of floral organ identity: stories from the MADS house.

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Journal:  Curr Opin Plant Biol       Date:  2001-02       Impact factor: 7.834

5.  Seed Germination in Desert Annuals: An Empirical Test of Adaptive Bet Hedging.

Authors:  M J Clauss; D L Venable
Journal:  Am Nat       Date:  2000-02       Impact factor: 3.926

6.  ELF3 encodes a circadian clock-regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway.

Authors:  X L Liu; M F Covington; C Fankhauser; J Chory; D R Wagner
Journal:  Plant Cell       Date:  2001-06       Impact factor: 11.277

7.  Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis.

Authors:  D J Kliebenstein; V M Lambrix; M Reichelt; J Gershenzon; T Mitchell-Olds
Journal:  Plant Cell       Date:  2001-03       Impact factor: 11.277

Review 8.  The nucleolus: an old factory with unexpected capabilities.

Authors:  M O Olson; M Dundr; A Szebeni
Journal:  Trends Cell Biol       Date:  2000-05       Impact factor: 20.808

9.  Auxin regulates the initiation and radial position of plant lateral organs.

Authors:  D Reinhardt; T Mandel; C Kuhlemeier
Journal:  Plant Cell       Date:  2000-04       Impact factor: 11.277

10.  Nuclear-localized BZR1 mediates brassinosteroid-induced growth and feedback suppression of brassinosteroid biosynthesis.

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  23 in total

1.  Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana.

Authors:  Maximilian Oliver Press; Christine Queitsch
Journal:  Genetics       Date:  2016-11-18       Impact factor: 4.562

Review 2.  It's not magic - Hsp90 and its effects on genetic and epigenetic variation.

Authors:  Rebecca A Zabinsky; Grace Alexandria Mason; Christine Queitsch; Daniel F Jarosz
Journal:  Semin Cell Dev Biol       Date:  2018-06-06       Impact factor: 7.727

3.  Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/Botrytis Pathosystem.

Authors:  Wei Zhang; Jason A Corwin; Daniel Copeland; Julie Feusier; Robert Eshbaugh; Fang Chen; Susana Atwell; Daniel J Kliebenstein
Journal:  Plant Cell       Date:  2017-10-17       Impact factor: 11.277

4.  Canalization of Tomato Fruit Metabolism.

Authors:  Saleh Alseekh; Hao Tong; Federico Scossa; Yariv Brotman; Florian Vigroux; Takayuki Tohge; Itai Ofner; Dani Zamir; Zoran Nikoloski; Alisdair R Fernie
Journal:  Plant Cell       Date:  2017-11-01       Impact factor: 11.277

5.  The significance of developmental robustness for species diversity.

Authors:  Rainer Melzer; Günter Theißen
Journal:  Ann Bot       Date:  2016-03-18       Impact factor: 4.357

6.  Resurrected Protein Interaction Networks Reveal the Innovation Potential of Ancient Whole-Genome Duplication.

Authors:  Zhicheng Zhang; Heleen Coenen; Philip Ruelens; Rashmi R Hazarika; Tareq Al Hindi; Georgianna K Oguis; Anja Vandeperre; Vera van Noort; Koen Geuten
Journal:  Plant Cell       Date:  2018-10-17       Impact factor: 11.277

Review 7.  Developmental stochasticity and variation in floral phyllotaxis.

Authors:  Miho S Kitazawa
Journal:  J Plant Res       Date:  2021-04-05       Impact factor: 2.629

8.  Convergent and distributed effects of the 3q29 deletion on the human neural transcriptome.

Authors:  Esra Sefik; Ryan H Purcell; Elaine F Walker; Gary J Bassell; Jennifer G Mulle
Journal:  Transl Psychiatry       Date:  2021-06-15       Impact factor: 6.222

9.  Coexpression network revealing the plasticity and robustness of population transcriptome during the initial stage of domesticating energy crop Miscanthus lutarioriparius.

Authors:  Shilai Xing; Chengcheng Tao; Zhihong Song; Wei Liu; Juan Yan; Lifang Kang; Cong Lin; Tao Sang
Journal:  Plant Mol Biol       Date:  2018-07-13       Impact factor: 4.076

10.  CLAVATA Signaling Ensures Reproductive Development in Plants across Thermal Environments.

Authors:  Daniel S Jones; Amala John; Kylie R VanDerMolen; Zachary L Nimchuk
Journal:  Curr Biol       Date:  2020-11-05       Impact factor: 10.834

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