Literature DB >> 23042085

Calcite surface structure and reactivity: molecular dynamics simulations and macroscopic surface modelling of the calcite-water interface.

M Wolthers1, D Di Tommaso, Z Du, N H de Leeuw.   

Abstract

Calcite-water interactions are important not only in carbon sequestration and the global carbon cycle, but also in contaminant behaviour in calcite-bearing host rock and in many industrial applications. Here we quantify the effect of variations in surface structure on calcite surface reactivity. Firstly, we employ classical Molecular Dynamics simulations of calcite surfaces containing an etch pit and a growth terrace, to show that the local environment in water around structurally different surface sites is distinct. In addition to observing the expected formation of more calcium-water interactions and hydrogen-bonds at lower-coordinated sites, we also observed subtle differences in hydrogen bonding around acute versus obtuse edges and corners. We subsequently used this information to refine the protonation constants for the calcite surface sites, according to the Charge Distribution MUltiSite Ion Complexation (CD-MUSIC) approach. The subtle differences in hydrogen bonding translate into markedly different charging behaviour versus pH, in particular for acute versus obtuse corner sites. The results show quantitatively that calcite surface reactivity is directly related to surface topography. The information obtained in this study is not only crucial for the improvement of existing macroscopic surface models of the reactivity of calcite towards contaminants, but also improves our atomic-level understanding of mineral-water interactions.

Entities:  

Year:  2012        PMID: 23042085     DOI: 10.1039/c2cp42290e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  4 in total

1.  Bonding, structural and thermodynamic analysis of dissociative adsorption of H3O+ ion onto calcite (101⁻4) surface: CPMD and DFT calculations.

Authors:  Mohammad Hadi Ghatee; Mohammad Mehdi Koleini
Journal:  J Mol Model       Date:  2017-11-06       Impact factor: 1.810

2.  Reconsidering Calcium Dehydration as the Rate-Determining Step in Calcium Mineral Growth.

Authors:  Janou A Koskamp; Sergio E Ruiz-Hernandez; Devis Di Tommaso; Alin Marin Elena; Nora H De Leeuw; Mariette Wolthers
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2019-10-16       Impact factor: 4.126

3.  Predicting hydration layers on surfaces using deep learning.

Authors:  Yashasvi S Ranawat; Ygor M Jaques; Adam S Foster
Journal:  Nanoscale Adv       Date:  2021-05-06

4.  Size-Dependent Affinity of Glycine and Its Short Oligomers to Pyrite Surface: A Model for Prebiotic Accumulation of Amino Acid Oligomers on a Mineral Surface.

Authors:  Rehana Afrin; Narangerel Ganbaatar; Masashi Aono; H James Cleaves Ii; Taka-Aki Yano; Masahiko Hara
Journal:  Int J Mol Sci       Date:  2018-01-25       Impact factor: 5.923

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.