Literature DB >> 23041282

Interdomain allostery promotes assembly of the poly(A) mRNA complex with PABP and eIF4G.

Nozhat Safaee1, Guennadi Kozlov, Anne M Noronha, Jingwei Xie, Christopher J Wilds, Kalle Gehring.   

Abstract

Many RNA-binding proteins contain multiple single-strand nucleic acid-binding domains and assemble into large multiprotein messenger ribonucleic acid protein (mRNP) complexes. The mechanisms underlying the self-assembly of these complexes are largely unknown. In eukaryotes, the association of the translation factors polyadenylate-binding protein-1 (PABP) and eIF4G is essential for high-level expression of polyadenylated mRNAs. Here, we report the crystal structure of the ternary complex poly(A)(11)·PABP(1-190)·eIF4G(178-203) at 2.0 Å resolution. Our NMR and crystallographic data show that eIF4G interacts with the RRM2 domain of PABP. Analysis of the interaction by small-angle X-ray scattering, isothermal titration calorimetry, and electromobility shift assays reveals that this interaction is allosterically regulated by poly(A) binding to PABP. Furthermore, we have confirmed the importance of poly(A) for the endogenous PABP and eIF4G interaction in immunoprecipitation experiments using HeLa cell extracts. Our findings reveal interdomain allostery as a mechanism for cooperative assembly of RNP complexes.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23041282     DOI: 10.1016/j.molcel.2012.09.001

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  63 in total

1.  Cytoplasmic poly(A)-binding protein 1 (PABPC1) interacts with the RNA-binding protein hnRNPLL and thereby regulates immunoglobulin secretion in plasma cells.

Authors:  Yuanzheng Peng; Juanjuan Yuan; Zhenchao Zhang; Xing Chang
Journal:  J Biol Chem       Date:  2017-06-13       Impact factor: 5.157

2.  Structural basis of nucleic acid binding by Nicotiana tabacum glycine-rich RNA-binding protein: implications for its RNA chaperone function.

Authors:  Fariha Khan; Mark A Daniëls; Gert E Folkers; Rolf Boelens; S M Saqlan Naqvi; Hugo van Ingen
Journal:  Nucleic Acids Res       Date:  2014-06-23       Impact factor: 16.971

3.  Structural study of the Fox-1 RRM protein hydration reveals a role for key water molecules in RRM-RNA recognition.

Authors:  Miroslav Krepl; Markus Blatter; Antoine Cléry; Fred F Damberger; Frédéric H T Allain; Jiri Sponer
Journal:  Nucleic Acids Res       Date:  2017-07-27       Impact factor: 16.971

Review 4.  'Black sheep' that don't leave the double-stranded RNA-binding domain fold.

Authors:  Michael L Gleghorn; Lynne E Maquat
Journal:  Trends Biochem Sci       Date:  2014-06-19       Impact factor: 13.807

5.  Mip6 binds directly to the Mex67 UBA domain to maintain low levels of Msn2/4 stress-dependent mRNAs.

Authors:  Manuel Martín-Expósito; Maria-Eugenia Gas; Nada Mohamad; Carme Nuño-Cabanes; Ana Tejada-Colón; Pau Pascual-García; Lorena de la Fuente; Belén Chaves-Arquero; Jonathan Merran; Jeffry Corden; Ana Conesa; José Manuel Pérez-Cañadillas; Jerónimo Bravo; Susana Rodríguez-Navarro
Journal:  EMBO Rep       Date:  2019-11-03       Impact factor: 8.807

6.  The Jigsaw Puzzle of mRNA Translation Initiation in Eukaryotes: A Decade of Structures Unraveling the Mechanics of the Process.

Authors:  Yaser Hashem; Joachim Frank
Journal:  Annu Rev Biophys       Date:  2018-03-01       Impact factor: 12.981

7.  Rotavirus Infection Alters Splicing of the Stress-Related Transcription Factor XBP1.

Authors:  Patrice Vende; Annie Charpilienne; Mariela Duarte; Matthieu Gratia; Cécile Laroche; Didier Poncet
Journal:  J Virol       Date:  2019-02-19       Impact factor: 5.103

Review 8.  How RNA-Binding Proteins Interact with RNA: Molecules and Mechanisms.

Authors:  Meredith Corley; Margaret C Burns; Gene W Yeo
Journal:  Mol Cell       Date:  2020-04-02       Impact factor: 17.970

9.  Solution structure of the two RNA recognition motifs of hnRNP A1 using segmental isotope labeling: how the relative orientation between RRMs influences the nucleic acid binding topology.

Authors:  Pierre Barraud; Frédéric H-T Allain
Journal:  J Biomol NMR       Date:  2012-12-18       Impact factor: 2.835

Review 10.  eIF4F: a retrospective.

Authors:  William C Merrick
Journal:  J Biol Chem       Date:  2015-08-31       Impact factor: 5.157

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