Literature DB >> 23034356

Behavioural mapping of a pelagic seabird: combining multiple sensors and a hidden Markov model reveals the distribution of at-sea behaviour.

Ben Dean1.   

Abstract

The use of miniature data loggers is rapidly increasing our understanding of the movements and habitat preferences of pelagic seabirds. However, objectively interpreting behavioural information from the large volumes of highly detailed data collected by such devices can be challenging. We combined three biologging technologies—global positioning system (GPS), saltwater immersion and time–depth recorders—to build a detailed picture of the at-sea behaviour of the Manx shearwater (Puffinus puffinus) during the breeding season. We used a hidden Markov model to explore discrete states within the combined GPS and immersion data, and found that behaviour could be organized into three principal activities representing (i) sustained direct flight, (ii) sitting on the sea surface, and (iii) foraging, comprising tortuous flight interspersed with periods of immersion. The additional logger data verified that the foraging activity corresponded well to the occurrence of diving. Applying this approach to a large tracking dataset revealed that birds from two different colonies foraged in local waters that were exclusive, but overlapped in one key area: the Irish Sea Front (ISF). We show that the allocation of time to each activity differed between colonies, with birds breeding furthest from the ISF spending the greatest proportion of time engaged in direct flight and the smallest proportion of time engaged in foraging activity. This type of analysis has considerable potential for application in future biologging studies and in other taxa.

Entities:  

Mesh:

Year:  2012        PMID: 23034356      PMCID: PMC3565783          DOI: 10.1098/rsif.2012.0570

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  15 in total

1.  Positional entropy during pigeon homing II: navigational interpretation of Bayesian latent state models.

Authors:  Tim Guilford; Stephen Roberts; Dora Biro; Iead Rezek
Journal:  J Theor Biol       Date:  2004-03-07       Impact factor: 2.691

2.  Positional entropy during pigeon homing I: application of Bayesian latent state modelling.

Authors:  Stephen Roberts; Tim Guilford; Iead Rezek; Dora Biro
Journal:  J Theor Biol       Date:  2004-03-07       Impact factor: 2.691

3.  Interpolation of animal tracking data in a fluid environment.

Authors:  Yann Tremblay; Scott A Shaffer; Shannon L Fowler; Carey E Kuhn; Birgitte I McDonald; Michael J Weise; Charle-André Bost; Henri Weimerskirch; Daniel E Crocker; Michael E Goebel; Daniel P Costa
Journal:  J Exp Biol       Date:  2006-01       Impact factor: 3.312

4.  Classifying movement behaviour in relation to environmental conditions using hidden Markov models.

Authors:  Toby A Patterson; Marinelle Basson; Mark V Bravington; John S Gunn
Journal:  J Anim Ecol       Date:  2009-06-26       Impact factor: 5.091

5.  The arcsine is asinine: the analysis of proportions in ecology.

Authors:  David I Warton; Francis K C Hui
Journal:  Ecology       Date:  2011-01       Impact factor: 5.499

6.  Flock-feeding on fish schools increases individual success in gulls.

Authors:  F Götmark; D W Winkler; M Andersson
Journal:  Nature       Date:  1986 Feb 13-19       Impact factor: 49.962

7.  Tracking of Arctic terns Sterna paradisaea reveals longest animal migration.

Authors:  Carsten Egevang; Iain J Stenhouse; Richard A Phillips; Aevar Petersen; James W Fox; Janet R D Silk
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-11       Impact factor: 11.205

8.  Black Petrels (Procellaria parkinsoni) patrol the ocean shelf-break: GPS tracking of a vulnerable procellariiform seabird.

Authors:  Robin Freeman; Todd Dennis; Todd Landers; David Thompson; Elizabeth Bell; Mike Walker; Tim Guilford
Journal:  PLoS One       Date:  2010-02-17       Impact factor: 3.240

9.  Does prey capture induce area-restricted search? A fine-scale study using GPS in a marine predator, the wandering albatross.

Authors:  Henri Weimerskirch; David Pinaud; Frédéric Pawlowski; Charles-André Bost
Journal:  Am Nat       Date:  2007-09-11       Impact factor: 3.926

10.  Flight dynamics of Cory's shearwater foraging in a coastal environment.

Authors:  Vitor H Paiva; Tim Guilford; Jessica Meade; Pedro Geraldes; Jaime A Ramos; Stefan Garthe
Journal:  Zoology (Jena)       Date:  2010-01-08       Impact factor: 2.240

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  22 in total

1.  Remotely sensed wind speed predicts soaring behaviour in a wide-ranging pelagic seabird.

Authors:  Rory Gibb; Akiko Shoji; Annette L Fayet; Chris M Perrins; Tim Guilford; Robin Freeman
Journal:  J R Soc Interface       Date:  2017-07       Impact factor: 4.118

2.  Foraging costs drive within-colony spatial segregation in shearwaters from two contrasting environments in the North Atlantic Ocean.

Authors:  Jorge M Pereira; Jaime A Ramos; Nathalie Almeida; Pedro M Araújo; Filipe R Ceia; Pedro Geraldes; Ana M Marques; Diana M Matos; Isabel Rodrigues; Ivo Dos Santos; Vitor H Paiva
Journal:  Oecologia       Date:  2022-01-19       Impact factor: 3.225

3.  Dual foraging and pair coordination during chick provisioning by Manx shearwaters: empirical evidence supported by a simple model.

Authors:  Akiko Shoji; Stéphane Aris-Brosou; Annette Fayet; Oliver Padget; Christopher Perrins; Tim Guilford
Journal:  J Exp Biol       Date:  2015-05-11       Impact factor: 3.312

4.  Extending the Functionality of Behavioural Change-Point Analysis with k-Means Clustering: A Case Study with the Little Penguin (Eudyptula minor).

Authors:  Jingjing Zhang; Kathleen M O'Reilly; George L W Perry; Graeme A Taylor; Todd E Dennis
Journal:  PLoS One       Date:  2015-04-29       Impact factor: 3.240

5.  Performance and Accuracy of Lightweight and Low-Cost GPS Data Loggers According to Antenna Positions, Fix Intervals, Habitats and Animal Movements.

Authors:  Marie-Amélie Forin-Wiart; Pauline Hubert; Pascal Sirguey; Marie-Lazarine Poulle
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

6.  Hidden Markov models: the best models for forager movements?

Authors:  Rocio Joo; Sophie Bertrand; Jorge Tam; Ronan Fablet
Journal:  PLoS One       Date:  2013-08-23       Impact factor: 3.240

7.  Daily activity budgets reveal a quasi-flightless stage during non-breeding in Hawaiian albatrosses.

Authors:  Sarah E Gutowsky; Lee Fg Gutowsky; Ian D Jonsen; Marty L Leonard; Maura B Naughton; Marc D Romano; Scott A Shaffer
Journal:  Mov Ecol       Date:  2014-11-19       Impact factor: 3.600

8.  Predictive ethoinformatics reveals the complex migratory behaviour of a pelagic seabird, the Manx Shearwater.

Authors:  Robin Freeman; Ben Dean; Holly Kirk; Kerry Leonard; Richard A Phillips; Chris M Perrins; Tim Guilford
Journal:  J R Soc Interface       Date:  2013-05-01       Impact factor: 4.118

9.  Direct quantification of energy intake in an apex marine predator suggests physiology is a key driver of migrations.

Authors:  Rebecca E Whitlock; Elliott L Hazen; Andreas Walli; Charles Farwell; Steven J Bograd; David G Foley; Michael Castleton; Barbara A Block
Journal:  Sci Adv       Date:  2015-09-25       Impact factor: 14.136

10.  Interpreting behaviors from accelerometry: a method combining simplicity and objectivity.

Authors:  Philip M Collins; Jonathan A Green; Victoria Warwick-Evans; Stephen Dodd; Peter J A Shaw; John P Y Arnould; Lewis G Halsey
Journal:  Ecol Evol       Date:  2015-10-02       Impact factor: 2.912

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